RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 GIPRP48546 466 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 DAPP51397 102 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 RAP1BP61224 184 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 RAP1AP62834 184 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 PIGFQ07326 219 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 GK3PQ14409 553 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 GPR139Q6DWJ6 353 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 FAHD1Q6P587 224 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 HDDC2Q7Z4H3 204 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 PAQR4Q8N4S7 273 aaPredicted RBP11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 LINC00471Q8N535 108 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 IQCF1Q8N6M8 205 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 OR4K13Q8NH42 304 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 PYDC1Q8WXC3 89 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 FBXO17Q96EF6 278 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 NMNAT3Q96T66 252 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 NUAK2Q9H093 628 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 ESRP2Q9H6T0 727 aaKnown RBP11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 KRCC1Q9NPI7 259 aaPredicted RBP11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 STX18Q9P2W9 335 aaKnown RBP11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 GRHPRQ9UBQ7 328 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 MOKQ9UQ07 419 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 CELSR1Q9NYQ6 3014 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 WNT11O96014 354 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 RAF1P04049 648 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 CD79AP11912 226 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 NOS3P29474 1203 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 IFNGR2P38484 337 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 CDH11P55287 796 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 UBE2NP61088 152 aaKnown RBP11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 NKX6-1P78426 367 aaPredicted RBP11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 NPRL3Q12980 569 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 RAB39AQ14964 217 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 GSG1Q2KHT4 349 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 NRN1LQ496H8 165 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 THEM4Q5T1C6 240 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 SLC35F1Q5T1Q4 408 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 C1QTNF12Q5T7M4 302 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 FBXW10Q5XX13 1052 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 SHQ1Q6PI26 577 aaKnown RBP11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 LYPD4Q6UWN0 246 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 TMEM108Q6UXF1 575 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 OR6V1Q8N148 313 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 LNX2Q8N448 690 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 SDR9C7Q8NEX9 313 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 IFT27Q9BW83 186 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 HCAR1Q9BXC0 346 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 WNT5BQ9H1J7 359 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 EMC7Q9NPA0 242 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 POLE4Q9NR33 117 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 TMEFF2Q9UIK5 374 aaPredicted RBP11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
PDLIM2-212ENST00000443561 ARID1AO14497 2285 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 OVOL3O00110 214 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 MITFO75030 526 aaPredicted RBP11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 OR8G3PP0DMU2 310 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 ZNF35P13682 527 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 ZNF32P17041 273 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 LAP3P28838 519 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 EPHA2P29317 976 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 HOXC12P31275 282 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 PTDSS1P48651 473 aaKnown RBP11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 RPS6KA3P51812 740 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 RAB1AP62820 205 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 MEP1BQ16820 701 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 MST1LQ2TV78 715 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 TMEM255AQ5JRV8 349 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 FAM27BQ5VT28 67 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 ACSM5Q6NUN0 579 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 LEG1Q6P5S2 330 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 SSX8Q7RTT4 187 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 ADCK1Q86TW2 530 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 DTX2Q86UW9 622 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 LRRC18Q8N456 261 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 CYB561A3Q8NBI2 242 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 SLC37A3Q8NCC5 494 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 OR5K1Q8NHB7 308 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 MBD6Q96DN6 1003 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 SNX18Q96RF0 628 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 PKP2Q99959 881 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 ZNF416Q9BWM5 594 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 TSSK6Q9BXA6 273 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 NMNAT2Q9BZQ4 307 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 GABARAPL1Q9H0R8 117 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 NGBQ9NPG2 151 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 TBC1D23Q9NUY8 699 aa11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 COA3Q9Y2R0 106 aaPredicted RBP11.12□□□□□ -0.63
PDLIM2-212ENST00000443561 A0A1W2PPL8 197 aa11.11□□□□□ -0.63
PDLIM2-212ENST00000443561 FAM171A2A8MVW0 826 aa11.11□□□□□ -0.63
PDLIM2-212ENST00000443561 ANKRD65E5RJM6 399 aa11.11□□□□□ -0.63
PDLIM2-212ENST00000443561 AHCYL1O43865 530 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms