RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 AKR7A2O43488 359 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 CHP2O43745 196 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 NEURL1O76050 574 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR5F1O95221 314 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 PAHP00439 452 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 BTG1P62324 171 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 OAFQ86UD1 273 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 LNX2Q8N448 690 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZFP41Q8N8Y5 198 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 POMGNT2Q8NAT1 580 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR11H7Q8NGC8 314 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 NEIL3Q8TAT5 605 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 SPRYD4Q8WW59 207 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 UFD1Q92890 307 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF350Q9GZX5 532 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 UBQLN3Q9H347 655 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 C20orf141Q9NUB4 165 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 HAO2Q9NYQ3 351 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 ELF5Q9UKW6 265 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 MUC3AQ02505 3323 aa6.62□□□□□ -1.35
CDC42BPA-208ENST00000442054 SHISA8B8ZZ34 492 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 LINC01387J3KSC0 135 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 MYL12BO14950 172 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 APOA1P02647 267 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF43P17038 809 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GALNSP34059 522 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 MAP2K3P46734 347 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC16A1P53985 500 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 RRAS2P62070 204 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GPR176Q14439 515 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 TRAM2Q15035 370 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 DMKNQ6E0U4 476 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 THSD4Q6ZMP0 1018 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GPR137CQ8N3F9 429 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 Q8N402 240 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 TMEM99Q8N816 258 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR11H4Q8NGC9 324 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 PAQR8Q8TEZ7 354 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 CREB3L1Q96BA8 519 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 TAAR6Q96RI8 345 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ABHD1Q96SE0 405 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 RBM24Q9BX46 236 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 FN3KQ9H479 309 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ADGRL4Q9HBW9 690 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 MEPEQ9NQ76 525 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF275Q9NSD4 429 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 KLHL9Q9P2J3 617 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 NOSIPQ9Y314 301 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 HECTD1Q9ULT8 2610 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 A0A1W2PNR3 127 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 SMIM30A4D0T7 59 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 E9PLN8 166 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 LYRM1O43325 122 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 IGHV3-9P01782 118 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 YES1P07947 543 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 NGFRP08138 427 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GUSBP08236 651 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ARSBP15848 533 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 EMDP50402 254 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 P2RX1P51575 399 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 SELENOVP59797 346 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 SNTB1Q13884 538 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR7A5Q15622 319 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 SNAPC1Q16533 368 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 NTRK2Q16620 822 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF684Q5T5D7 378 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 LHFPL3Q86UP9 236 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 RFLNBQ8N5W9 214 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR4C3Q8NH37 302 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 CTHRC1Q96CG8 243 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 DIRAS2Q96HU8 199 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 KLHL15Q96M94 604 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 VKORC1Q9BQB6 163 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF443Q9Y2A4 671 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 TP53BP1Q12888 1972 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 A0A0A6YYJ9 748 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR14I1A6ND48 311 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 H0YC42 278 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GPR171O14626 319 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 HLA-DQA2P01906 255 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 CD1AP06126 327 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GKN3PP0CG01 181 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 PRG2P13727 222 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 FUT1P19526 365 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 NPR2P20594 1047 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 P2RX3P56373 397 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 RASGEF1BQ0VAM2 473 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 GALEQ14376 348 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 CARD17Q5XLA6 110 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 TMPRSS11FQ6ZWK6 438 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 SSX6Q7RTT6 188 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 C17orf47Q8NEP4 570 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 NFAM1Q8NET5 270 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 FNDC9Q8TBE3 224 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 STACQ99469 402 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 MCHR1Q99705 422 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 PARPBPQ9NWS1 579 aa6.61□□□□□ -1.35
CDC42BPA-208ENST00000442054 CHD6Q8TD26 2715 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 C11orf98E9PRG8 122 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms