RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 SLC22A31A6NKX4 558 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 A8MXE2 369 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 ZNF587BE7ETH6 402 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 J3QRE1 110 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 SLC1A7O00341 560 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 SMNDC1O75940 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBR3-205ENST00000439681 KRT33AO76009 404 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 ITGA5P08648 1049 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 CCDC159P0C7I6 412 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 PSKH1P11801 424 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 NR2C1P13056 603 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 BMP5P22003 454 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 IGHV1-2P23083 117 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 CRHBPP24387 322 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 MTNR1AP48039 350 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 RPS7P62081 194 aaKnown RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 CSNK2BP67870 215 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 ARF1P84077 181 aaKnown RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 HSF2Q03933 536 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 GGTLC2Q14390 218 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 KCNMB1Q16558 191 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 RBM48Q5RL73 367 aaKnown RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 Q6ZT83 130 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 ZNF627Q7L945 461 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 ATCAYQ86WG3 371 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 TIGD4Q8IY51 512 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 RELL2Q8NC24 303 aaPredicted RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 OR6K6Q8NGW6 343 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 SMAP2Q8WU79 429 aaPredicted RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 C11orf40Q8WZ69 217 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 RNFT2Q96EX2 444 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 CCDC120Q96HB5 630 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 YTHDF1Q9BYJ9 559 aaKnown RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 PIGMQ9H3S5 423 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 DUSP21Q9H596 190 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 WDR76Q9H967 626 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 ADGRL4Q9HBW9 690 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 PAK1IP1Q9NWT1 392 aaPredicted RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBR3-205ENST00000439681 EXOGQ9Y2C4 368 aaKnown RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 RPL36Q9Y3U8 105 aaKnown RBP6.58□□□□□ -1.36
UBR3-205ENST00000439681 ALPK2Q86TB3 2170 aa6.58□□□□□ -1.36
UBR3-205ENST00000439681 SVILO95425 2214 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 TRIM64A6NGJ6 449 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 MSTNO14793 375 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SELENOFO60613 162 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 APOL3O95236 402 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 MPGP29372 298 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 CENPAP49450 140 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 ZNF84P51523 738 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 HCCSP53701 268 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 MRPS34P82930 218 aaKnown RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 MVKQ03426 396 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 GLO1Q04760 184 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 MEP1BQ16820 701 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 C4orf17Q53FE4 359 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 C9orf135Q5VTT2 229 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SHFQ7M4L6 423 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 ZNF433Q8N7K0 673 aaPredicted RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 OR4F15Q8NGB8 312 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 OR52I1Q8NGK6 324 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 REPIN1Q9BWE0 567 aaKnown RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 NELFAQ9H3P2 528 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SEC61A2Q9H9S3 476 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 POLE4Q9NR33 117 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 TMEM38BQ9NVV0 291 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 CHD6Q8TD26 2715 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 A0A1W2PPL8 197 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 EIF4E1BA6NMX2 242 aaKnown RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 SNTNA6NMZ2 147 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 ZNF99A8MXY4 864 aaPredicted RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 PTGES3LE9PB15 166 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 FAM20BO75063 409 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SEC14L2O76054 403 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 HRGP04196 525 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 MRPL3P09001 348 aaKnown RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 SBK2P0C263 348 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 COX5AP20674 150 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 CHN2P52757 468 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 BLVRAP53004 296 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SLC35A2P78381 396 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 PIGFQ07326 219 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 RAB40BQ12829 278 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 ENDOGQ14249 297 aaKnown RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 CDSNQ15517 529 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SGCAQ16586 387 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 PCK2Q16822 640 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 TEX30Q5JUR7 227 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 LCN1P1Q5VSP4 162 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 FAM27BQ5VT28 67 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 BEND4Q6ZU67 534 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 ABHD12BQ7Z5M8 362 aaPredicted RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 LUZP2Q86TE4 346 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 OR51G2Q8NGK0 314 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 BCL2L2Q92843 193 aaPredicted RBP6.57□□□□□ -1.36
UBR3-205ENST00000439681 BOD1Q96IK1 185 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SIGLEC11Q96RL6 698 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 FOXB1Q99853 325 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SH3GL3Q99963 347 aa6.57□□□□□ -1.36
UBR3-205ENST00000439681 SIAEQ9HAT2 523 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms