RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 GOLGA3Q08378 1498 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 CEP152O94986 1710 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 PEAK1Q9H792 1746 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 FMN2Q9NZ56 1722 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 FANCIQ9NVI1 1328 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 QRICH2Q9H0J4 1663 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 TRBV6-6A0A0A6YYG2 114 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 A0A1B0GVI7 797 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 OR2AG2A6NM03 316 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 ZNF726A6NNF4 738 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 C11orf94C9JXX5 98 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 FGF1P05230 155 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 CSF3P09919 207 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 PSG2P11465 335 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 FOLR1P15328 257 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 CRISP2P16562 243 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 TCN1P20061 433 aaPredicted RBP2.26□□□□□ -2.05
VPS41-207ENST00000439468 RORAP35398 523 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 HSD17B2P37059 387 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 CRYBB2P43320 205 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 RFX3P48380 749 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 RORCP51449 518 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 FBXW4P57775 412 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 RPS21P63220 83 aaKnown RBP2.26□□□□□ -2.05
VPS41-207ENST00000439468 KCNJ2P63252 427 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 MADCAM1Q13477 382 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 TGFBIQ15582 683 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 MRPL23Q16540 153 aaKnown RBP2.26□□□□□ -2.05
VPS41-207ENST00000439468 SGCAQ16586 387 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 PRAMEF20Q5VT98 475 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 CYB5R2Q6BCY4 276 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 Q6ZSR3 168 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 NANOGNBQ7Z5D8 188 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 RNF175Q8N4F7 328 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 MS4A15Q8N5U1 240 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 VN1R2Q8NFZ6 395 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 OR1S2Q8NGQ3 325 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 SLC2A14Q8TDB8 520 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 GABARAPL3Q9BY60 117 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 PLA2G2FQ9BZM2 168 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 ARHGAP5Q13017 1502 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 SYCP2Q9BX26 1530 aa2.26□□□□□ -2.05
VPS41-207ENST00000439468 NCOA3Q9Y6Q9 1424 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 KNDC1Q76NI1 1749 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 LRRIQ1Q96JM4 1722 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 MKI67P46013 3256 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 CNTNAP1P78357 1384 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 DHX57Q6P158 1386 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 CEMIPQ8WUJ3 1361 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 MTCL1Q9Y4B5 1905 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 PKD1L2Q7Z442 2459 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 A0A0U1RQS6 177 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 CIB4A0PJX0 185 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 TMX2-CTNND1H3BSU7 103 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 CD5LO43866 347 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 MGRN1O60291 552 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 SUPT3HO75486 399 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 CLIC3O95833 236 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 TSPAN13O95857 204 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 IGLV2-23P01705 113 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 MCF2P10911 925 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ZNF30P17039 623 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 CMA1P23946 247 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 SLC26A3P40879 764 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 SSR1P43307 286 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 YAP1P46937 504 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 NMUP48645 174 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 NCBP2P52298 156 aaKnown RBP eCLIP2.25□□□□□ -2.05
VPS41-207ENST00000439468 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 SUB1P53999 127 aaKnown RBP eCLIP2.25□□□□□ -2.05
VPS41-207ENST00000439468 GPX6P59796 221 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 BEX3Q00994 111 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 MPPED2Q15777 294 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 TMEM183BQ1AE95 376 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 RFX4Q33E94 735 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ALKBH6Q3KRA9 238 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ZBED5Q49AG3 693 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 HSP90AB3PQ58FF7 597 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 SASS6Q6UVJ0 657 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 NCCRP1Q6ZVX7 275 aaPredicted RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 TMEM183AQ8IXX5 376 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 CCDC54Q8NEL0 328 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 OR56B2PQ8NGI1 322 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 OR2G3Q8NGZ4 309 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 KIFAP3Q92845 792 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ZNF799Q96GE5 643 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 TPD52L3Q96J77 140 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 PKIBQ9C010 78 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 CDC42EP4Q9H3Q1 356 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 MRPL47Q9HD33 250 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 TM9SF3Q9HD45 589 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 GLRX2Q9NS18 164 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ZNF223Q9UK11 482 aaPredicted RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 KIAA1257Q9ULG3 409 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 PACSIN2Q9UNF0 486 aaPredicted RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 STARD10Q9Y365 291 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 WSB1Q9Y6I7 421 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 LMTK2Q8IWU2 1503 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ERVK-7P63135 1459 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 XRN1Q8IZH2 1706 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms