RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OR51V1Q9H2C8 321 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 ELOVL5Q9NYP7 299 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 BLOC1S6Q9UL45 172 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 SLC5A6Q9Y289 635 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 COA3Q9Y2R0 106 aaPredicted RBP11.17□□□□□ -0.62
SCLT1-202ENST00000439369 PCDHGB1Q9Y5G3 927 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 IGKV1D-43A0A0B4J1Z2 117 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 GYPBP06028 91 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 GAAP10253 952 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 CLUP10909 449 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 PIPP12273 146 aaPredicted RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 PSMB1P20618 241 aaKnown RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 MSR1P21757 451 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 BMP5P22003 454 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 PAX7P23759 505 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 GSTT1P30711 240 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 PYCR1P32322 319 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 UQCRFS1P47985 274 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 RPS7P62081 194 aaKnown RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 ADORA2A-AS1P86434 159 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF91Q05481 1191 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 KLHL12Q53G59 568 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 KLHL22Q53GT1 634 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 FAM27BQ5VT28 67 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 OR7E24Q6IFN5 339 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 LAIR2Q6ISS4 152 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 ANKRD16Q6P6B7 361 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 XKRXQ6PP77 449 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 SSX8Q7RTT4 187 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 C17orf78Q8N4C9 275 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 OR6K6Q8NGW6 343 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 LILRB4Q8NHJ6 448 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 KISS1RQ969F8 398 aaPredicted RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 LRRC46Q96FV0 321 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 FOXB1Q99853 325 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 RBM24Q9BX46 236 aaKnown RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 OR10A4Q9H209 315 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 NELFAQ9H3P2 528 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 RERGLQ9H628 205 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 SIAEQ9HAT2 523 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 POLE4Q9NR33 117 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 TMEM38BQ9NVV0 291 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 SCN3BQ9NY72 215 aa11.16□□□□□ -0.62
SCLT1-202ENST00000439369 CNOT2Q9NZN8 540 aaKnown RBP11.16□□□□□ -0.62
SCLT1-202ENST00000439369 A0A1W2PPL8 197 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 EFCAB10A6NFE3 127 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 IGHV3-9P01782 118 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 ITGA5P08648 1049 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 OR8G3PP0DMU2 310 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 DBTP11182 482 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 SLC15A1P46059 708 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 ASCL1P50553 236 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 RAB40BQ12829 278 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 PCK2Q16822 640 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 BCDIN3DQ7Z5W3 292 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 SYT9Q86SS6 491 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF433Q8N7K0 673 aaPredicted RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 RELL2Q8NC24 303 aaPredicted RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 IPCEF1Q8WWN9 437 aaPredicted RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 NSMAFQ92636 917 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 NABP1Q96AH0 204 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 INTS14Q96SY0 518 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 CNN2Q99439 309 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 MOV10Q9HCE1 1003 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 UBAP1Q9NZ09 502 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 EXOGQ9Y2C4 368 aaKnown RBP11.15□□□□□ -0.62
SCLT1-202ENST00000439369 TPRKBQ9Y3C4 175 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 COMMD3-BMI1R4GMX3 469 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 BSNQ9UPA5 3926 aa11.15□□□□□ -0.62
SCLT1-202ENST00000439369 C12orf71A8MTZ7 269 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 EEF1E1-BLOC1S5C9J1V9 151 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SLC1A7O00341 560 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 EEF1E1O43324 174 aaKnown RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 MRPS14O60783 128 aaKnown RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 TMCC2O75069 709 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 FADS2O95864 444 aaKnown RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 HLA-DQA2P01906 255 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 TFP02787 698 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 CST2P09228 141 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SBK2P0C263 348 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF823P16415 610 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 IGHV1-2P23083 117 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 CD79BP40259 229 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 PCBD1P61457 104 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ACTC1P68032 377 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ACTA1P68133 377 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ETFDHQ16134 617 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SMN1Q16637 294 aaKnown RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SFRP5Q5T4F7 317 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF474Q6S9Z5 364 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF813Q6ZN06 617 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 NCCRP1Q6ZVX7 275 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms