RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 RGS11O94810 467 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 PPICP45877 212 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 SLC37A1P57057 533 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 ELOCQ15369 112 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 NKAIN2Q5VXU1 208 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 LRRC69Q6ZNQ3 347 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 BIVMQ86UB2 503 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 ZNF321PQ8N8H1 164 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 OR51D1Q8NGF3 324 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 OTOSQ8NHW6 89 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 LMX1AQ8TE12 382 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 NXF5Q9H1B4 397 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 KCNG2Q9UJ96 466 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 ARPC4-TTLL3A0A0A6YYG9 625 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 TTLL8A6PVC2 850 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 GPANK1O95872 356 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 BGLAPP02818 100 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 POU3F4P49335 361 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 H2BFSP57053 126 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 NXPH1P58417 271 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 BAMBIQ13145 260 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 HLXQ14774 488 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 C2orf68Q2NKX9 166 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 B3GNTL1Q67FW5 361 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 PM20D2Q8IYS1 436 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 OR4D10Q8NGI6 311 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 OR5M1Q8NGP8 315 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 ZNF563Q8TA94 476 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 PTPMT1Q8WUK0 201 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 OR8B4Q96RC9 309 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 ELF4Q99607 663 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 LAT2Q9GZY6 243 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 MFSD2BA6NFX1 497 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 BCAT2O15382 392 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 ITGA5P08648 1049 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 AKAIN1P0CW23 69 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 ZP3P21754 424 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 S100A11P31949 105 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 MAZP56270 477 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 GUCA2AQ02747 115 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 ODF4Q2M2E3 257 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 BPHLQ86WA6 291 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 OR2AK2Q8NG84 335 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 TSEN15Q8WW01 171 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 ATOH1Q92858 354 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 SLC17A5Q9NRA2 495 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 SDHAF2Q9NX18 166 aa14.79□□□□□ -0.04
CLCNKA-203ENST00000439316 LOC100289279A0A1B0GTE1 492 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 H3BSH0 61 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SLC17A2O00624 439 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 CDC40O60508 579 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 RP2O75695 350 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 KDM4BO94953 1096 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 NMBP08949 121 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 HOXA6P31267 233 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 CAPZBP47756 277 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SLC6A8P48029 635 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 AFF3P51826 1226 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SSBP1Q04837 148 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 BIKQ13323 160 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SLC17A1Q14916 467 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 TOMM20Q15388 145 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 RAB11BQ15907 218 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 YOD1Q5VVQ6 348 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 FAM166AQ6J272 317 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 RGS7BPQ6MZT1 257 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 TMUB2Q71RG4 321 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 GALNT11Q8NCW6 608 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 EDAQ92838 391 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SLC46A1Q96NT5 459 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 CDV3Q9UKY7 258 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 PLCL2Q9UPR0 1127 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 KCNMB2Q9Y691 235 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SPEGQ15772 3267 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SPTBP11277 2137 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 TRAV18A0A075B6X5 111 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 FRG2CA6NGY1 282 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 F5H5P2 479 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 ARPC5O15511 151 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SDC3O75056 442 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SIX6O95475 246 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 RLN1P04808 185 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 ZNF35P13682 527 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 GTF2F2P13984 249 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 PPP3CBP16298 524 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 POU3F2P20265 443 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 CALCRP30988 508 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 ZNF117Q03924 483 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 KCNAB1Q14722 419 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 MPPED2Q15777 294 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 SFRP5Q5T4F7 317 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 ASPHD2Q6ICH7 369 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 PRSS42Q7Z5A4 293 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 GKN2Q86XP6 184 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 MUC20Q8N307 709 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 ASB17Q8WXJ9 295 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 FAM3DQ96BQ1 224 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 RTN4RQ9BZR6 473 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 KCNK15Q9H427 330 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms