RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 TAS2R19P59542 299 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 GMFBP60983 142 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 MFSD13AQ14CX5 517 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 TOMM34Q15785 309 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-207ENST00000433762 MEP1BQ16820 701 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 HLA-DQA1Q5Y7H0 255 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 DEGS2Q6QHC5 323 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 SYT13Q7L8C5 426 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 GRINAQ7Z429 371 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 ZNF441Q8N8Z8 693 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 OR2AK2Q8NG84 335 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 OR6M1Q8NGM8 313 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 SFXN2Q96NB2 322 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 ZNF587Q96SQ5 575 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-207ENST00000433762 IGHV5-51A0A0C4DH38 117 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 A6NIZ1 184 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 H7C1C5 153 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 I3L521 148 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 DOK2O60496 412 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 AQP8O94778 261 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 WNT11O96014 354 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-207ENST00000433762 TMIGD3P0DMS9 266 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-207ENST00000433762 VSIG10L2P0DP72 767 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 PPP3CBP16298 524 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 S100A11P31949 105 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 RAP1BP61224 184 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 LCN6P62502 163 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 RAP1AP62834 184 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 ZP4Q12836 540 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 CSRP2Q16527 193 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 NKAIN2Q5VXU1 208 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 GPAT4Q86UL3 456 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 FRMD1Q8N878 549 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 OR10AC1Q8NH08 325 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 SLC25A28Q96A46 364 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 OR8D2Q9GZM6 311 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 APMAPQ9HDC9 416 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 SEMA5BQ9P283 1151 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 DHDHQ9UQ10 334 aa12.32□□□□□ -0.44
COL6A3-207ENST00000433762 A0A087WV48 116 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 A0A1W2PR77 199 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ZSCAN5BA6NJL1 495 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 F5H5P2 479 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 PMS2P2O95744 297 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ITGB2P05107 769 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 LPLP06858 475 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ITGA5P08648 1049 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ACHEP22303 614 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 CD27P26842 260 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ZMYND11Q15326 602 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ACKR1Q16570 336 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 PCK2Q16822 640 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 TMEM225Q6GV28 225 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 DNM1P34Q6PK57 102 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 NKAIN3Q8N8D7 197 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ZNF321PQ8N8H1 164 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 OR51D1Q8NGF3 324 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 SCARB1Q8WTV0 552 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 PIGKQ92643 395 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 RBPMSQ93062 196 aaKnown RBP12.31□□□□□ -0.44
COL6A3-207ENST00000433762 ZNF524Q96C55 264 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 FOXRED1Q96CU9 486 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-207ENST00000433762 NUDT9Q9BW91 350 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 TBL1XR1Q9BZK7 514 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 WWTR1Q9GZV5 400 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 TTYH1Q9H313 450 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-207ENST00000433762 MRPL22Q9NWU5 206 aaKnown RBP12.31□□□□□ -0.44
COL6A3-207ENST00000433762 MED11Q9P086 117 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 COPS7AQ9UBW8 275 aa12.31□□□□□ -0.44
COL6A3-207ENST00000433762 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-207ENST00000433762 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 LOC390937A0A1W2PQ73 354 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 SLC22A23A1A5C7 686 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 OR2W5A6NFC9 320 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 H3BUI4 141 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 SUSD5O60279 629 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 RP2O75695 350 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 TOXO94900 526 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 OR6A2O95222 327 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 SPTBP11277 2137 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 RAB6AP20340 208 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 CCKBRP32239 447 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 INSM1Q01101 510 aaPredicted RBP12.3□□□□□ -0.44
COL6A3-207ENST00000433762 GLO1Q04760 184 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 PLCXD2Q0VAA5 305 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 LPCAT3Q6P1A2 487 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 SLC29A4Q7RTT9 530 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 OR51A4Q8NGJ6 313 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 OR1N1Q8NGS0 311 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 OR52N5Q8NH56 324 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 TGM7Q96PF1 710 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 AMELYQ99218 206 aa12.3□□□□□ -0.44
COL6A3-207ENST00000433762 PRMT8Q9NR22 394 aaPredicted RBP12.3□□□□□ -0.44
COL6A3-207ENST00000433762 PPIEQ9UNP9 301 aaKnown RBP12.3□□□□□ -0.44
COL6A3-207ENST00000433762 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms