RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 LAPTM4AQ15012 233 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 PABPC1L2AQ5JQF8 200 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 C10orf128Q5T292 105 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 ARMC4Q5T2S8 1044 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 LIPNQ5VXI9 398 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 CGB2Q6NT52 195 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 OR2T12Q8NG77 320 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 OR1J1Q8NGS3 322 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF519Q8TB69 540 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 C11orf40Q8WZ69 217 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF416Q9BWM5 594 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 BCL2L14Q9BZR8 327 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 KCNN2Q9H2S1 579 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 SAR1AQ9NR31 198 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 STX18Q9P2W9 335 aaKnown RBP14.6□□□□□ -0.07
TRIM39-209ENST00000428728 UGT2A1Q9Y4X1 527 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 IGLV3-9A0A075B6K5 115 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 LOC100653049A0A140TA62 436 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 TPD52L2O43399 206 aaKnown RBP14.59□□□□□ -0.07
TRIM39-209ENST00000428728 TCF21O43680 179 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 KRT34O76011 436 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 NPPAP01160 153 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 IGF2P01344 180 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 TFP02787 698 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 IFI30P13284 250 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF32P17041 273 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 ITGA2P17301 1181 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 DRD4P21917 467 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 PCMT1P22061 227 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 RAD52P43351 418 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF133P52736 654 aaPredicted RBP14.59□□□□□ -0.07
TRIM39-209ENST00000428728 ERVK-25P63136 954 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 MRPS34P82930 218 aaKnown RBP14.59□□□□□ -0.07
TRIM39-209ENST00000428728 SGCAQ16586 387 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 ALG10Q5BKT4 473 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 SPATA46Q5T0L3 261 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 IGFN1Q86VF2 1251 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 MEX3DQ86XN8 651 aaKnown RBP14.59□□□□□ -0.07
TRIM39-209ENST00000428728 MICU2Q8IYU8 434 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 RFLNBQ8N5W9 214 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 CLDN22Q8N7P3 220 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 PCYOX1LQ8NBM8 494 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 CPEB3Q8NE35 698 aaKnown RBP14.59□□□□□ -0.07
TRIM39-209ENST00000428728 NABP1Q96AH0 204 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 TMEM186Q96B77 213 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 PRRC1Q96M27 445 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 RACGAP1Q9H0H5 632 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 TXNIPQ9H3M7 391 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 MRGBPQ9NV56 204 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 HIF1ANQ9NWT6 349 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 GID8Q9NWU2 228 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 SLCO1C1Q9NYB5 712 aa14.59□□□□□ -0.07
TRIM39-209ENST00000428728 GMPR2Q9P2T1 348 aaKnown RBP14.59□□□□□ -0.07
TRIM39-209ENST00000428728 HAX1O00165 279 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 MSMBP08118 114 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 TSPAN19P0C672 248 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 GAAP10253 952 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 THRBP10828 461 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 FUT4P22083 530 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 STOMP27105 288 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 KDELR2P33947 212 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 YAP1P46937 504 aaKnown RBP14.58□□□□□ -0.08
TRIM39-209ENST00000428728 TMEM33P57088 247 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 MRPS11P82912 194 aaKnown RBP14.58□□□□□ -0.08
TRIM39-209ENST00000428728 ST3GAL3Q11203 375 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 AVPI1Q5T686 147 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 POU5F2Q8N7G0 328 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 AKR7LQ8NHP1 331 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 LIPHQ8WWY8 451 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 RCN3Q96D15 328 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 NMD3Q96D46 503 aaKnown RBP14.58□□□□□ -0.08
TRIM39-209ENST00000428728 BPIFA2Q96DR5 249 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 METTL17Q9H7H0 456 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-209ENST00000428728 SIAEQ9HAT2 523 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 SMURF2Q9HAU4 748 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 RHCGQ9UBD6 479 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 A4GNTQ9UNA3 340 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 HIF3AQ9Y2N7 669 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 CAPN7Q9Y6W3 813 aa14.58□□□□□ -0.08
TRIM39-209ENST00000428728 WNK2Q9Y3S1 2297 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 TRAV27A0A087WT01 109 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 NPIPB13A6NJU9 1138 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 NPIPB4C9JG80 1138 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 MGRN1O60291 552 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 NR2C1P13056 603 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 WNT5AP41221 380 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 MVKQ03426 396 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 TSTQ16762 297 aaKnown RBP14.57□□□□□ -0.08
TRIM39-209ENST00000428728 PCGF3Q3KNV8 242 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 SHQ1Q6PI26 577 aaKnown RBP14.57□□□□□ -0.08
TRIM39-209ENST00000428728 VTCN1Q7Z7D3 282 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF101Q8IZC7 436 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 OR51F2Q8NH61 342 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 LRRC37BQ96QE4 947 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 ARMCX1Q9P291 453 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 GRIP1Q9Y3R0 1128 aa14.57□□□□□ -0.08
TRIM39-209ENST00000428728 ARHGAP32A7KAX9 2087 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 IGHV1-69-2A0A0G2JMI3 117 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 A0A1W2PPL8 197 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 ELOVL7A1L3X0 281 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms