RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 EIF1AXP47813 144 aaKnown RBP13.91□□□□□ -0.18
SHOX2-202ENST00000425436 PPP5CP53041 499 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 C3orf33Q6P1S2 294 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 KCTD20Q7Z5Y7 419 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 SCAIQ8N9R8 606 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 MFSD8Q8NHS3 518 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 AP3S1Q92572 193 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 Q96M85 177 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 KLHL15Q96M94 604 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 OR5B2Q96R09 309 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 PTDSS2Q9BVG9 487 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 RNF167Q9H6Y7 350 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 TAS2R5Q9NYW4 299 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 FAM215AQ9Y5M1 114 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 MYO18BQ8IUG5 2567 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 HIVEP3Q5T1R4 2406 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 A0A1W2PQL4 384 aaPredicted RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 FIGNL2A6NMB9 653 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 XKRYO14609 159 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 PLPP2O43688 288 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 WDR1O75083 606 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 CD1AP06126 327 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 CLUP10909 449 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 IDUAP35475 653 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 RPS19P39019 145 aaKnown RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 CDKN2AP42771 156 aaKnown RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 GBX2P52951 348 aaPredicted RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 RPS25P62851 125 aaKnown RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 ZP4Q12836 540 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 MRPL28Q13084 256 aaKnown RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 KRR1Q13601 381 aaKnown RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 CCDC58Q4VC31 144 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 C1orf185Q5T7R7 199 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 HBMQ6B0K9 141 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 B3GLCTQ6Y288 498 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 VASH1Q7L8A9 365 aaPredicted RBP13.9□□□□□ -0.18
SHOX2-202ENST00000425436 CHMP1BQ7LBR1 199 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 SLC35F2Q8IXU6 374 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 MS4A15Q8N5U1 240 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 OR10D3Q8NH80 312 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 ZPLD1Q8TCW7 415 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 SLC25A46Q96AG3 418 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 ARL5BQ96KC2 179 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 GALNT8Q9NY28 637 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 MEMO1Q9Y316 297 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 ARHGAP21Q5T5U3 1957 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 TENM4Q6N022 2769 aa13.9□□□□□ -0.18
SHOX2-202ENST00000425436 IQCMA0A1B0GVH7 501 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 NPIPB13A6NJU9 1138 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 GJE1A6NN92 205 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 NPIPB4C9JG80 1138 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 RNF13O43567 381 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 CXCL13O43927 109 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 SERPINA3P01011 423 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 IGHMP01871 453 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 F13BP05160 661 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 GABRA1P14867 456 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 GTF2E2P29084 291 aaKnown RBP13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ETV6P41212 452 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 CARD18P57730 90 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 RPL27P61353 136 aaKnown RBP13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ZNF85Q03923 595 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 PMPCAQ10713 525 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ACSF3Q4G176 576 aaPredicted RBP13.9□□□□□ -0.19
SHOX2-202ENST00000425436 C22orf42Q6IC83 251 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 PAMR1Q6UXH9 720 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ESPNLQ6ZVH7 1005 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 SLC16A9Q7RTY1 509 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 MFSD4AQ8N468 514 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ARIH2OSQ8N7S6 290 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 OR2V1Q8NHB1 315 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 FNDC8Q8TC99 324 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 SNX33Q8WV41 574 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 TMEM203Q969S6 136 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 SLC25A36Q96CQ1 311 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 RASD2Q96D21 266 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ZMYND19Q96E35 227 aaPredicted RBP13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ADGRG7Q96K78 797 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ALG12Q9BV10 488 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 TXNIPQ9H3M7 391 aa13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ISG20L2Q9H9L3 353 aaKnown RBP13.9□□□□□ -0.19
SHOX2-202ENST00000425436 ZNF346Q9UL40 294 aaKnown RBP13.9□□□□□ -0.19
SHOX2-202ENST00000425436 PHF3Q92576 2039 aaKnown RBP13.89□□□□□ -0.19
SHOX2-202ENST00000425436 PCNX1Q96RV3 2341 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 A0A1B0GUH1 482 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 A0A1W2PRG6 482 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 A6NIZ1 184 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 PLPP3O14495 311 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 RGS9O75916 674 aaPredicted RBP13.89□□□□□ -0.19
SHOX2-202ENST00000425436 CDRT1O95170 752 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 LALBAP00709 142 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 GYPBP06028 91 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 MRPL3P09001 348 aaKnown RBP13.89□□□□□ -0.19
SHOX2-202ENST00000425436 TACSTD2P09758 323 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 BMP4P12644 408 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 CFL1P23528 166 aaKnown RBP13.89□□□□□ -0.19
SHOX2-202ENST00000425436 GRPRP30550 384 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 RAP1BP61224 184 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 RAP1AP62834 184 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 FABP5Q01469 135 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms