RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 NOS1APO75052 506 aaPredicted RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 EPHA8P29322 1005 aaPredicted RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 DCDP81605 110 aaKnown RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 MRPL28Q13084 256 aaKnown RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 ST3GAL2Q16842 350 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 MS4A18Q3C1V0 323 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 Q6ZTK2 550 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 LUZP2Q86TE4 346 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 NAA40Q86UY6 237 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 PPP1R3BQ86XI6 285 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 CMIPQ8IY22 773 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 SCAIQ8N9R8 606 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 DNASE2BQ8WZ79 361 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 KLHL9Q9P2J3 617 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 MN1Q10571 1320 aaPredicted RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 SLC22A23A1A5C7 686 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 PLPP3O14495 311 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 RLN1P04808 185 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 POLR2HP52434 150 aaKnown RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
PTPRN-204ENST00000423636 FAM198BQ6UWH4 519 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 CDC20BQ86Y33 519 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 EXD3Q8N9H8 876 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 OR11H4Q8NGC9 324 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 OR5D18Q8NGL1 313 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 KLHL15Q96M94 604 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 CMKLR1Q99788 373 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 DEFB126Q9BYW3 111 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 INPP5EQ9NRR6 644 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 LRP12Q9Y561 859 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 RELNP78509 3460 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 OR4C45A6NMZ5 311 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SLC6A1P30531 599 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 RAD52P43351 418 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 CLDN20P56880 219 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 Q499Y3 187 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SLC22A6Q4U2R8 563 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 LRRC18Q8N456 261 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 WDR77Q9BQA1 342 aaPredicted RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 FARSAQ9Y285 508 aaKnown RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 TMA7Q9Y2S6 64 aaKnown RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ICE1Q9Y2F5 2266 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 A8MVM7 634 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 HRGP04196 525 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 RRAS2P62070 204 aaPredicted RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 BDH1Q02338 343 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 PUDPQ08623 228 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 MYBPHQ13203 477 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 NKPD1Q17RQ9 610 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 GLYATL3Q5SZD4 288 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 NUP210LQ5VU65 1888 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ASPHD2Q6ICH7 369 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 C17orf107Q6ZR85 190 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ASCC1Q8N9N2 400 aaKnown RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ACBD4Q8NC06 268 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 OR56B4Q8NH76 319 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 GUCD1Q96NT3 240 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ATG5Q9H1Y0 275 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 M0QYG6 137 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SEC14L5O43304 696 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ABHD16AO95870 558 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SERPINA3P01011 423 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 RBMS1P29558 406 aaKnown RBP10.69□□□□□ -0.7
PTPRN-204ENST00000423636 POU3F4P49335 361 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 TMEM225Q6GV28 225 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 PYHIN1Q6K0P9 492 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 RHBDD2Q6NTF9 364 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SLITRK4Q8IW52 837 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 TMEM105Q8N8V8 129 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 GALNT6Q8NCL4 622 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF248Q8NDW4 579 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 OTOSQ8NHW6 89 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SAP25Q8TEE9 199 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 SPSB2Q99619 263 aa10.69□□□□□ -0.7
PTPRN-204ENST00000423636 ITGA10O75578 1167 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 IGHV3-9P01782 118 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 TACSTD2P09758 323 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PATE4P0C8F1 98 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 CALCBP10092 127 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF823P16415 610 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 DPP4P27487 766 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 HLA-DMAP28067 261 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 OTX2P32243 289 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 SELENOPP49908 381 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PLA1AQ53H76 456 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF440Q8IYI8 595 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 SYS1Q8N2H4 156 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 DEDD2Q8WXF8 326 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ACOT12Q8WYK0 555 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 COMMD4Q9H0A8 199 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF768Q9H5H4 540 aaKnown RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 FAM172BPA6NC97 362 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 NR0B2Q15466 257 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 MOGAT2Q3SYC2 334 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms