RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 CMAHPQ9Y471 501 aa12.79□□□□□ -0.36
LINC01840-201ENST00000421870 CSPG4Q6UVK1 2322 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 SH3PXD2BA1X283 911 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 LY6HO94772 140 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 PTHP01270 115 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 T-ENOLP0DO92 83 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 CDAP32320 146 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 SMIM11AP58511 58 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 CD47Q08722 323 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 TOP3AQ13472 1001 aaPredicted RBP12.78□□□□□ -0.36
LINC01840-201ENST00000421870 MSMPQ1L6U9 139 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 ARHGAP24Q8N264 748 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 LRRC18Q8N456 261 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 CLDN22Q8N7P3 220 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 FAM168AQ92567 244 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
LINC01840-201ENST00000421870 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
LINC01840-201ENST00000421870 C1orf198Q9H425 327 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 RNF121Q9H920 327 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 IL1RAPQ9NPH3 570 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 NRIP3Q9NQ35 241 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
LINC01840-201ENST00000421870 NSD1Q96L73 2696 aaPredicted RBP12.77□□□□□ -0.36
LINC01840-201ENST00000421870 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 VWC2LB2RUY7 222 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 GPRIN2O60269 458 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 GADD45GO95257 159 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 SNAP29O95721 258 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 CSF3P09919 207 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 SLC25A16P16260 332 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 HMGA2P52926 109 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 FXYD6P3P58550 94 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ERVK-25P63136 954 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 MXRA7P84157 204 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 GALK2Q01415 458 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 PLP2Q04941 152 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 LOXL1Q08397 574 aaPredicted RBP12.77□□□□□ -0.37
LINC01840-201ENST00000421870 FGD3Q5JSP0 725 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ZER1Q7Z7L7 766 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 CCDC197Q8NCU1 140 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 CPEB3Q8NE35 698 aaKnown RBP12.77□□□□□ -0.37
LINC01840-201ENST00000421870 SLC30A7Q8NEW0 376 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 OR52J3Q8NH60 311 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 NSMAFQ92636 917 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 Q96M85 177 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.37
LINC01840-201ENST00000421870 GPA33Q99795 319 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 MRPL37Q9BZE1 423 aaKnown RBP12.77□□□□□ -0.37
LINC01840-201ENST00000421870 RAB1BQ9H0U4 201 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 KCNN2Q9H2S1 579 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 GRHPRQ9UBQ7 328 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ADAM21Q9UKJ8 722 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ADAM18Q9Y3Q7 739 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 FKBP7Q9Y680 259 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ANK3Q12955 4377 aaKnown RBP12.77□□□□□ -0.37
LINC01840-201ENST00000421870 ABCA1O95477 2261 aa12.77□□□□□ -0.37
LINC01840-201ENST00000421870 IQCMA0A1B0GVH7 501 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 NDUFS8O00217 210 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 NDUFB2O95178 105 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 PCSK6P29122 969 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 RPL4P36578 427 aaKnown RBP12.76□□□□□ -0.37
LINC01840-201ENST00000421870 SGCAQ16586 387 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 GPR139Q6DWJ6 353 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
LINC01840-201ENST00000421870 PAQR4Q8N4S7 273 aaPredicted RBP12.76□□□□□ -0.37
LINC01840-201ENST00000421870 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
LINC01840-201ENST00000421870 MCUR1Q96AQ8 359 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 MYOZ1Q9NP98 299 aaPredicted RBP12.76□□□□□ -0.37
LINC01840-201ENST00000421870 V9GYQ6 96 aa12.76□□□□□ -0.37
LINC01840-201ENST00000421870 FN1P02751 2386 aaKnown RBP12.76□□□□□ -0.37
LINC01840-201ENST00000421870 LOC390937A0A1W2PQ73 354 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 PRSS37A4D1T9 235 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 SYNGR3O43761 229 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 FABP3P05413 133 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 CST2P09228 141 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 CCL2P13500 99 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 ZNF32P17041 273 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 CALB2P22676 271 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 LAP3P28838 519 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 SDHAP31040 664 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 RAD52P43351 418 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 PDLIM4P50479 330 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 UCP2P55851 309 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 RPS23P62266 143 aaKnown RBP12.75□□□□□ -0.37
LINC01840-201ENST00000421870 PSG4Q00888 419 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 TBC1D28Q2M2D7 210 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 MESTQ5EB52 335 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 PABPC1L2AQ5JQF8 200 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 DPY19L2P2Q6ZN68 376 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 RINLQ6ZS11 566 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 LRP11Q86VZ4 500 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 POM121L2Q96KW2 1035 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 WACQ9BTA9 647 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms