RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 DUSP13Q9UII6 198 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 ZNF346Q9UL40 294 aaKnown RBP8.1□□□□□ -1.11
NUP50-205ENST00000419387 FZR1Q9UM11 496 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 MED31Q9Y3C7 131 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 A0A1W2PPW3 197 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 NPIPB13A6NJU9 1138 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 FAM220BPB1ANY3 271 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 NPIPB4C9JG80 1138 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 DCTN3O75935 186 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 SNAP29O95721 258 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 HPXP02790 462 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 FAM157BP0CG42 384 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 CCL2P13500 99 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 IFNA8P32881 189 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 RAD52P43351 418 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 ZNF133P52736 654 aaPredicted RBP8.09□□□□□ -1.11
NUP50-205ENST00000419387 SELENOVP59797 346 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 SELENOWP63302 87 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 PLP2Q04941 152 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 ST3GAL3Q11203 375 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 MAD2L1BPQ15013 274 aaPredicted RBP8.09□□□□□ -1.11
NUP50-205ENST00000419387 TRIP10Q15642 601 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 TBC1D28Q2M2D7 210 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 CR1LQ2VPA4 569 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 LRRC23Q53EV4 343 aaPredicted RBP8.09□□□□□ -1.11
NUP50-205ENST00000419387 CYBRD1Q53TN4 286 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 C10orf128Q5T292 105 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 ARMC4Q5T2S8 1044 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 RGS7BPQ6MZT1 257 aaPredicted RBP8.09□□□□□ -1.11
NUP50-205ENST00000419387 LRRC18Q8N456 261 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 PAQR4Q8N4S7 273 aaPredicted RBP8.09□□□□□ -1.11
NUP50-205ENST00000419387 CCDC197Q8NCU1 140 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 RBM15BQ8NDT2 890 aaKnown RBP8.09□□□□□ -1.11
NUP50-205ENST00000419387 OR2T12Q8NG77 320 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 OR1J2Q8NGS2 313 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 MOSPD2Q8NHP6 518 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 CMTM5Q96DZ9 223 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 TPD52L3Q96J77 140 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 SNX18Q96RF0 628 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 LRMDAQ9H2I8 198 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 KCNN2Q9H2S1 579 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 SIAEQ9HAT2 523 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 TAAR3PQ9P1P4 343 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 ABCD2Q9UBJ2 740 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 CD300AQ9UGN4 299 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 GPR160Q9UJ42 338 aa8.09□□□□□ -1.11
NUP50-205ENST00000419387 SVEP1Q4LDE5 3571 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 ELOVL7A1L3X0 281 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 HTR3EA5X5Y0 456 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 NDUFAB1O14561 156 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 CLPTM1O96005 669 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 LCKP06239 509 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 MMP7P09237 267 aaPredicted RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 NAT2P11245 290 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 ZNF250P15622 560 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 ACHEP22303 614 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 APLNRP35414 380 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 GPR6P46095 362 aaPredicted RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 CDH15P55291 814 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 UCP2P55851 309 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 TMEM33P57088 247 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 MRPS11P82912 194 aaKnown RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 MRPS34P82930 218 aaKnown RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 HSF2Q03933 536 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 CCNIQ14094 377 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 TAF11Q15544 211 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 NKPD1Q17RQ9 610 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 ALKBH6Q3KRA9 238 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 ALG10Q5BKT4 473 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 MICU2Q8IYU8 434 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 ZNF519Q8TB69 540 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 SYNPRQ8TBG9 265 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 C11orf40Q8WZ69 217 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 LZICQ8WZA0 190 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 HDAC2Q92769 488 aaKnown RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 PRRC1Q96M27 445 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 HOPXQ9BPY8 73 aaPredicted RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 BCL2L14Q9BZR8 327 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 TXNIPQ9H3M7 391 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 SMURF2Q9HAU4 748 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 TAGLN3Q9UI15 199 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 TMEFF2Q9UIK5 374 aaPredicted RBP8.08□□□□□ -1.12
NUP50-205ENST00000419387 A4GNTQ9UNA3 340 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 AP3M1Q9Y2T2 418 aa8.08□□□□□ -1.12
NUP50-205ENST00000419387 IGLV3-9A0A075B6K5 115 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 IGKV1D-43A0A0B4J1Z2 117 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 C17orf100A8MU93 164 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 B4DSR2 109 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 PIP5K1CO60331 668 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 SLC2A10O95528 541 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 NR2C1P13056 603 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 IFI30P13284 250 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 CDAP32320 146 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 NUDT2P50583 147 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 DVL1P1P54792 670 aaPredicted RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 KLF3P57682 345 aaPredicted RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 PSME3P61289 254 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 RPL27P61353 136 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms