RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ADRA2AP08913 450 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 MMP7P09237 267 aaPredicted RBP14.18□□□□□ -0.14
LINC00404-201ENST00000418660 TCN1P20061 433 aaPredicted RBP14.18□□□□□ -0.14
LINC00404-201ENST00000418660 USF1P22415 310 aaPredicted RBP14.18□□□□□ -0.14
LINC00404-201ENST00000418660 CDAP32320 146 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 SGCAQ16586 387 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 ZBED5Q49AG3 693 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 SAMD4BQ5PRF9 694 aaKnown RBP14.18□□□□□ -0.14
LINC00404-201ENST00000418660 ZCCHC24Q8N2G6 241 aaKnown RBP14.18□□□□□ -0.14
LINC00404-201ENST00000418660 FAM86B1Q8N7N1 296 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 ARIH2OSQ8N7S6 290 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 OR1J2Q8NGS2 313 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 NSMAFQ92636 917 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 NABP1Q96AH0 204 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 PYURFQ96I23 114 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 PIMREGQ9BSJ6 248 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 CDH20Q9HBT6 801 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 YAE1D1Q9NRH1 226 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 CD300AQ9UGN4 299 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 MAGEL2Q9UJ55 1249 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 ZANQ9Y493 2812 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 NAV3Q8IVL0 2385 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 M0R233 179 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 SYNGR3O43761 229 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 CRLF1O75462 422 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 ITGA2P17301 1181 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 RPL4P36578 427 aaKnown RBP14.17□□□□□ -0.14
LINC00404-201ENST00000418660 NR4A2P43354 598 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 ERVK-25P63136 954 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 VLDLRP98155 873 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 KRT72Q14CN4 511 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 CARTPTQ16568 116 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 TBC1D28Q2M2D7 210 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 FGD3Q5JSP0 725 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 FAM27BQ5VT28 67 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 PAQR4Q8N4S7 273 aaPredicted RBP14.17□□□□□ -0.14
LINC00404-201ENST00000418660 CLDN22Q8N7P3 220 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 FAM46AQ96IP4 442 aaKnown RBP14.17□□□□□ -0.14
LINC00404-201ENST00000418660 DHRS1Q96LJ7 313 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 FOXN4Q96NZ1 517 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 CDRT15Q96T59 188 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 SYT3Q9BQG1 590 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 NDEL1Q9GZM8 345 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 LRMDAQ9H2I8 198 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 MS4A5Q9H3V2 200 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 CCNB1IP1Q9NPC3 277 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 NDE1Q9NXR1 346 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 REV1Q9UBZ9 1251 aa14.17□□□□□ -0.14
LINC00404-201ENST00000418660 PTP4A3O75365 173 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 STAMBPO95630 424 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 CD14P08571 375 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 CCL2P13500 99 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 DAOP14920 347 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 ZNF26P17031 533 aaPredicted RBP14.16□□□□□ -0.14
LINC00404-201ENST00000418660 APLNRP35414 380 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 GUCA1AP43080 201 aaPredicted RBP14.16□□□□□ -0.14
LINC00404-201ENST00000418660 OMPP47874 163 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 LIMS1P48059 325 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 HSF2Q03933 536 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 SPATS1Q496A3 300 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 IQCCQ4KMZ1 466 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 PABPC1L2AQ5JQF8 200 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 C16orf89Q6UX73 402 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 FOXL2NBQ6ZUU3 175 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 LRP11Q86VZ4 500 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 ZNF540Q8NDQ6 660 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 KRCC1Q9NPI7 259 aaPredicted RBP14.16□□□□□ -0.14
LINC00404-201ENST00000418660 GRHPRQ9UBQ7 328 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 DUSP13Q9UII6 198 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 TLN2Q9Y4G6 2542 aa14.16□□□□□ -0.14
LINC00404-201ENST00000418660 TRBV4-1A0A0J9YWV2 114 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 A8MV72 311 aaPredicted RBP14.15□□□□□ -0.14
LINC00404-201ENST00000418660 AHCYL1O43865 530 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 DIRAS1O95057 198 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 NDUFB2O95178 105 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 SEMG1P04279 462 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 CST2P09228 141 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 FAM157BP0CG42 384 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 ZNF32P17041 273 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 APEX1P27695 318 aaKnown RBP14.15□□□□□ -0.14
LINC00404-201ENST00000418660 LAP3P28838 519 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 MSX2P35548 267 aaPredicted RBP14.15□□□□□ -0.14
LINC00404-201ENST00000418660 RAD52P43351 418 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 MNAT1P51948 309 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 UCP2P55851 309 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 SMIM11AP58511 58 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 GGTLC2Q14390 218 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 SEC23BQ15437 767 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 RGS7BPQ6MZT1 257 aaPredicted RBP14.15□□□□□ -0.14
LINC00404-201ENST00000418660 ZNF786Q8N393 782 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 CPEB3Q8NE35 698 aaKnown RBP14.15□□□□□ -0.14
LINC00404-201ENST00000418660 UBASH3BQ8TF42 649 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 Q96M85 177 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 NSMCE2Q96MF7 247 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 FUZQ9BT04 418 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 ADAM21Q9UKJ8 722 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 FZR1Q9UM11 496 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 SIGLEC7Q9Y286 467 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 ADAM18Q9Y3Q7 739 aa14.15□□□□□ -0.14
LINC00404-201ENST00000418660 V9GYQ6 96 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms