RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CD47Q08722 323 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 ALG10Q5BKT4 473 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 ARPINQ7Z6K5 226 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 GLCCI1Q86VQ1 547 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 PAQR4Q8N4S7 273 aaPredicted RBP12.63□□□□□ -0.39
CBX3-203ENST00000409747 RFLNBQ8N5W9 214 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 TPD52L3Q96J77 140 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 TXNIPQ9H3M7 391 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 HINT3Q9NQE9 182 aaKnown RBP12.63□□□□□ -0.39
CBX3-203ENST00000409747 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
CBX3-203ENST00000409747 HIF3AQ9Y2N7 669 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 ELOVL7A1L3X0 281 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 C17orf100A8MU93 164 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 SASH3O75995 380 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
CBX3-203ENST00000409747 DRD4P21917 467 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 TEKQ02763 1124 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 FAM205BPQ63HN1 556 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 MOSPD2Q8NHP6 518 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 NKIRAS2Q9NYR9 191 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
CBX3-203ENST00000409747 TCF21O43680 179 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 KRT34O76011 436 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 SLC2A10O95528 541 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 COL8A2P25067 703 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 GUCA1AP43080 201 aaPredicted RBP12.62□□□□□ -0.39
CBX3-203ENST00000409747 SELENOWP63302 87 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 SCGB2A2Q13296 93 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 C1orf174Q8IYL3 243 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 CLDND2Q8NHS1 167 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 BPIFA2Q96DR5 249 aa12.62□□□□□ -0.39
CBX3-203ENST00000409747 EIF3KQ9UBQ5 218 aaKnown RBP12.62□□□□□ -0.39
CBX3-203ENST00000409747 ANK2Q01484 3957 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 NCR1O76036 304 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 CLPTM1O96005 669 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 IGHMP01871 453 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 IFNW1P05000 195 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 STOMP27105 288 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 TOP3AQ13472 1001 aaPredicted RBP12.61□□□□□ -0.39
CBX3-203ENST00000409747 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 ANKDD1AQ495B1 522 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 PABPC1L2AQ5JQF8 200 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 THEM4Q5T1C6 240 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 HDAC2Q92769 488 aaKnown RBP12.61□□□□□ -0.39
CBX3-203ENST00000409747 YIPF5Q969M3 257 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 RBP7Q96R05 134 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 RACGAP1Q9H0H5 632 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 NARFLQ9H6Q4 476 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 A4GNTQ9UNA3 340 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 GRIP1Q9Y3R0 1128 aa12.61□□□□□ -0.39
CBX3-203ENST00000409747 A6NIZ1 184 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 PIP5K1CO60331 668 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 RP2O75695 350 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 MSMBP08118 114 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 IFI30P13284 250 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 CCNOP22674 350 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 CDAP32320 146 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 MAGEB1P43366 347 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 RAP1BP61224 184 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 RPL27P61353 136 aaKnown RBP12.6□□□□□ -0.39
CBX3-203ENST00000409747 ERVS71-1P61550 626 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 RAP1AP62834 184 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 LAPTM4AQ15012 233 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 SGCAQ16586 387 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 FAM209AQ5JX71 171 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 RINLQ6ZS11 566 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 OFCC1Q8IZS5 231 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 OR1J1Q8NGS3 322 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 OR51F2Q8NH61 342 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 NSMAFQ92636 917 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 NABP1Q96AH0 204 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 NMD3Q96D46 503 aaKnown RBP12.6□□□□□ -0.39
CBX3-203ENST00000409747 FNDC11Q9BVV2 318 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 DECR2Q9NUI1 292 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 UGT2A1Q9Y4X1 527 aa12.6□□□□□ -0.39
CBX3-203ENST00000409747 TPD52L2O43399 206 aaKnown RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 IGHV3-13P01766 116 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 ANPEPP15144 967 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 ZNF32P17041 273 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 GCH1P30793 250 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 GDI2P50395 445 aaKnown RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 PCBD1P61457 104 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 CCL8P80075 99 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 FMODQ06828 376 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
CBX3-203ENST00000409747 TRAM2Q15035 370 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 ZNF718Q3SXZ3 478 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 FAM27BQ5VT28 67 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 CGB2Q6NT52 195 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 ALDH16A1Q8IZ83 802 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 TEX29Q8N6K0 151 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms