RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KLHDC9Q8NEP7 349 aa7.73□□□□□ -1.17
SCN9A-203ENST00000409672 DPF1Q92782 380 aa7.73□□□□□ -1.17
SCN9A-203ENST00000409672 USP22Q9UPT9 525 aa7.73□□□□□ -1.17
SCN9A-203ENST00000409672 PRELID1Q9Y255 219 aa7.73□□□□□ -1.17
SCN9A-203ENST00000409672 K7EQM0 130 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 GASTP01350 101 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 C7P10643 843 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 MYF6P23409 242 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 RTL8BQ17RB0 113 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 FAM198BQ6UWH4 519 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 C17orf107Q6ZR85 190 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 Q6ZRG5 221 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TGIF2LYQ8IUE0 185 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF511Q8NB15 262 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 FBXO27Q8NI29 283 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 WFDC5Q8TCV5 224 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 MITD1Q8WV92 249 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TSLPQ969D9 159 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CMBLQ96DG6 245 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ASB16Q96NS5 453 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 IKZF5Q9H5V7 419 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF835Q9Y2P0 537 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 MMACHCQ9Y4U1 282 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 DEFB108AA8MXU0 73 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 AOAHP28039 575 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NPY4RP50391 375 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ATP4BP51164 291 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 RAB5BP61020 215 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 UBE2NLQ5JXB2 153 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 C1orf210Q8IVY1 113 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ACY3Q96HD9 319 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 MKRN2Q9H000 416 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 BTNL2Q9UIR0 455 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 FBXL2Q9UKC9 423 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NUP188Q5SRE5 1749 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 S100A4P26447 101 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 RIPPLY1Q0D2K3 151 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 OR11A1Q9GZK7 315 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CHST8Q9H2A9 424 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NOX4Q9NPH5 578 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 IDSB3KWA1 339 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 F5H697 171 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 SRFP11831 508 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CCL2P13500 99 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CEBPDP49716 269 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 SLC5A12Q1EHB4 618 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF766Q5HY98 468 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 SPANXN5Q5MJ07 72 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 FAM122CQ6P4D5 195 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 DNAJC5GQ8N7S2 189 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 BIN3Q9NQY0 253 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 SH2D1BO14796 132 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TRHRP34981 398 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF93P35789 620 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 INSM1Q01101 510 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 C3AR1Q16581 482 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 SPINK9Q5DT21 86 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 FAM109BQ6ICB4 259 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CISD2Q8N5K1 135 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ISG20Q96AZ6 181 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TSSK2Q96PF2 358 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TXNL4BQ9NX01 149 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NFAT5O94916 1531 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 PHRF1Q9P1Y6 1649 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CYR61O00622 381 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CDX4O14627 284 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NUDT7P0C024 238 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CPT2P23786 658 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 RAB15P59190 212 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 SORDQ00796 357 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 FAM74A1Q5RGS3 127 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 GPR32P1Q8NGA4 272 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 OR6S1Q8NH40 331 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ARL11Q969Q4 196 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 EAF1Q96JC9 268 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NIPAL2Q9H841 368 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 KLF13Q9Y2Y9 288 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 PIGBOS1A0A0B4J2F0 54 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 GPM6AP51674 278 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 GPR176Q14439 515 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TRIP6Q15654 476 aaKnown RBP7.72□□□□□ -1.17
SCN9A-203ENST00000409672 STUMQ69YW2 141 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 OR51D1Q8NGF3 324 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 RTL8AQ9BWD3 113 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 TAS2R16Q9NYV7 291 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 PRRT4C9JH25 899 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NME4O00746 187 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CXCL13O43927 109 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 PDGFAP04085 211 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 CSF3P09919 207 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 NFATC3Q12968 1075 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ACOT7LQ6ZUV0 252 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF767PQ75MW2 155 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 BABAM2Q9NXR7 383 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 IL17CQ9P0M4 197 aa7.72□□□□□ -1.17
SCN9A-203ENST00000409672 WDR1O75083 606 aa7.71□□□□□ -1.17
SCN9A-203ENST00000409672 ICOSLGO75144 302 aa7.71□□□□□ -1.17
SCN9A-203ENST00000409672 OLFM2O95897 454 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms