RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CR1P17927 2039 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 LY6HO94772 140 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF250P15622 560 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF23P17027 643 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 GSK3BP49841 420 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 NUDT2P50583 147 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 UCP2P55851 309 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 TMEM33P57088 247 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 RUNX1T1Q06455 604 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 RGS7BPQ6MZT1 257 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF730Q6ZMV8 503 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 VTCN1Q7Z7D3 282 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 CPLX4Q7Z7G2 160 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 SYT9Q86SS6 491 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 MOSPD2Q8NHP6 518 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 NMD3Q96D46 503 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 ELAC2Q9BQ52 826 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 BEX2Q9BXY8 128 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 MRPL37Q9BZE1 423 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 CDH20Q9HBT6 801 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 CCNB1IP1Q9NPC3 277 aa12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 SAMD4AQ9UPU9 718 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-205ENST00000409588 A0A1W2PRQ8 180 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 SH3PXD2BA1X283 911 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 EFCAB9A8MZ26 197 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 FFAR1O14842 300 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 LMX1BO60663 402 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 SERPINA1P01009 418 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 MT-ND5P03915 603 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 MMP7P09237 267 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 TACSTD2P09758 323 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 FAM157CP0CG43 387 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 APEHP13798 732 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 ITGA2P17301 1181 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 RHCEP18577 417 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 TUBG1P23258 451 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 APLNRP35414 380 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 CHN2P52757 468 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 CTXN1P60606 82 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 PSME3P61289 254 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 DGCR6Q14129 220 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 GGTLC2Q14390 218 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 CARTPTQ16568 116 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 PCGF3Q3KNV8 242 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 SPATS1Q496A3 300 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 FAM209AQ5JX71 171 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 FAM166AQ6J272 317 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 NRMQ8IXM6 262 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 FAM162AQ96A26 154 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 GORASP2Q9H8Y8 452 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 NMNAT1Q9HAN9 279 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 KRCC1Q9NPI7 259 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 TUBG2Q9NRH3 451 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 MAN2C1Q9NTJ4 1040 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 EIF3KQ9UBQ5 218 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 TIMM10BQ9Y5J6 103 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 ENPP4Q9Y6X5 453 aa12.5□□□□□ -0.41
NIF3L1-205ENST00000409588 CHD3Q12873 2000 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 A0A087WUU8 490 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 SNX3O60493 162 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 PRSS23O95084 383 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 CST2P09228 141 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 PATE4P0C8F1 98 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 SMIM11AP58511 58 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 HSF2Q03933 536 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 CD47Q08722 323 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 RIN1Q13671 783 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 ZBED5Q49AG3 693 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 GLYATQ6IB77 296 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 ARL9Q6T311 187 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 OR51A7Q8NH64 312 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 FGFBP3Q8TAT2 258 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 HDAC2Q92769 488 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 RDH5Q92781 318 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 HSH2DQ96JZ2 352 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 SHARPINQ9H0F6 387 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 CHODLQ9H9P2 273 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 DCAF13Q9NV06 445 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 NDE1Q9NXR1 346 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 NKIRAS2Q9NYR9 191 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 GRHPRQ9UBQ7 328 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 KCNS2Q9ULS6 477 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 SNX13Q9Y5W8 968 aa12.49□□□□□ -0.41
NIF3L1-205ENST00000409588 IGLV3-9A0A075B6K5 115 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 XKRYO14609 159 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 CD14P08571 375 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 MAKP20794 623 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 ACHEP22303 614 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 STOMP27105 288 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 LIPAP38571 399 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms