RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ZNF433Q8N7K0 673 aaPredicted RBP18.52■□□□□ 0.56
USP39-203ENST00000409470 SLC26A10Q8NG04 563 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 SLC22A4Q9H015 551 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 ANKRD10Q9NXR5 420 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 DKKL1Q9UK85 242 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 GTF2A1LQ9UNN4 478 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 A0A0B4J203 849 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 A0A0G2JMP0 313 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 A0A0X1KG70 313 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 SULT2B1O00204 365 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 SEC14L5O43304 696 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 MT-CO3P00414 261 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 SNRPBP14678 240 aaKnown RBP18.52■□□□□ 0.55
USP39-203ENST00000409470 PTGS2P35354 604 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 RFX2P48378 723 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 DSCR4P56555 118 aaPredicted RBP18.52■□□□□ 0.55
USP39-203ENST00000409470 RAET1LQ5VY80 246 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 CELF2-AS1Q8N7Q2 184 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 DTX3Q8N9I9 347 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 OR4M2Q8NGB6 313 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 OR5H6Q8NGV6 325 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 ZNF671Q8TAW3 534 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 C4orf45Q96LM5 186 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 RBP7Q96R05 134 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 CDC6Q99741 560 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 SLITRK2Q9H156 845 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 TCF7L1Q9HCS4 588 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 FOXJ2Q9P0K8 574 aa18.52■□□□□ 0.55
USP39-203ENST00000409470 CACNA1CQ13936 2221 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 CCDC187A0A096LP49 1063 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 IGKV1D-43A0A0B4J1Z2 117 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 FREM3P0C091 2139 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 RBMS1P29558 406 aaKnown RBP18.51■□□□□ 0.55
USP39-203ENST00000409470 INPP1P49441 399 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 RIDAP52758 137 aaKnown RBP18.51■□□□□ 0.55
USP39-203ENST00000409470 ROM1Q03395 351 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 CHAF1BQ13112 559 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 WDR38Q5JTN6 314 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 B3GNTL1Q67FW5 361 aaPredicted RBP18.51■□□□□ 0.55
USP39-203ENST00000409470 MDGA2Q7Z553 956 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 RDH10Q8IZV5 341 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 OR52N5Q8NH56 324 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 SGCZQ96LD1 299 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 NEDD4LQ96PU5 975 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 SPRY4Q9C004 299 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 C11orf54Q9H0W9 315 aaPredicted RBP18.51■□□□□ 0.55
USP39-203ENST00000409470 P4HTMQ9NXG6 502 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 CLEC4AQ9UMR7 237 aa18.51■□□□□ 0.55
USP39-203ENST00000409470 TRBV5-5A0A0J9YX44 114 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 A0A1B0GVC2 190 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 A6NIN4 97 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 KIR3DL2P43630 455 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 P2RY4P51582 365 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 CLRN1P58418 232 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 SLC35A1P78382 337 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 TIGD3Q6B0B8 471 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 OR7E24Q6IFN5 339 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 GPR148Q8TDV2 347 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 RNF128Q8TEB7 428 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 SACM1LQ9NTJ5 587 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 A0A1W2PNU3 283 aaPredicted RBP18.5■□□□□ 0.55
USP39-203ENST00000409470 TRABD2BA6NFA1 517 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 H3BSH0 61 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 ZNF254O75437 659 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 PITPNBP48739 271 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 ZNF544Q6NX49 715 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 FDX2Q6P4F2 183 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 ESX1Q8N693 406 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 MIB2Q96AX9 1013 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 OXGR1Q96P68 337 aa18.5■□□□□ 0.55
USP39-203ENST00000409470 ZNF814B7Z6K7 855 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 HLA-DQB1P01920 261 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 P04436 131 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 CAMK2DQ13557 499 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 CARTPTQ16568 116 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 HES5Q5TA89 166 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 DHRS13Q6UX07 377 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 NHLRC1Q6VVB1 395 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 TMPPEQ6ZT21 453 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 LINC00346Q8IVM7 164 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 GLB1L2Q8IW92 636 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 UBE2J2Q8N2K1 259 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 OR10AC1Q8NH08 325 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 LRP12Q9Y561 859 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 PLA2G10O15496 165 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 CBR3O75828 277 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 IGHG1P01857 330 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 SERPINA7P05543 415 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 ZNF43P17038 809 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 TOMM20Q15388 145 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 TEX30Q5JUR7 227 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 THEM4Q5T1C6 240 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 HDDC2Q7Z4H3 204 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 DCXRQ7Z4W1 244 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 OR10H5Q8NGA6 315 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 HPS1Q92902 700 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 TMEM41AQ96HV5 264 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 GFI1Q99684 422 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.49■□□□□ 0.55
USP39-203ENST00000409470 HDHD2Q9H0R4 259 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms