RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ZNF250P15622 560 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 GATA3P23771 443 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 RPL4P36578 427 aaKnown RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 IFNGR2P38484 337 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 UGT2B15P54855 530 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 RPL27P61353 136 aaKnown RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 PIN1Q13526 163 aaPredicted RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 SELPLGQ14242 412 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 MELKQ14680 651 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 FAM120AOSQ5T036 256 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 FAM27BQ5VT28 67 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 GPR139Q6DWJ6 353 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 HACD2Q6Y1H2 254 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 ZNF730Q6ZMV8 503 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 COMTD1Q86VU5 262 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 FAM156AQ8NDB6 213 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 FAM162AQ96A26 154 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 MSI2Q96DH6 328 aaKnown RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 ZNF837Q96EG3 531 aaPredicted RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 ZNF583Q96ND8 569 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 MRPL37Q9BZE1 423 aaKnown RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 TMEFF2Q9UIK5 374 aaPredicted RBP11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 ZDHHC8Q9ULC8 765 aa11.07□□□□□ -0.64
SNORD88B-201ENST00000408454 FN1P02751 2386 aaKnown RBP11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 PLCE1Q9P212 2302 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 TRAV20A0A0B4J274 112 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 IGHV4-61A0A0C4DH41 118 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 C17orf100A8MU93 164 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 CLDN25C9JDP6 229 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 IFNL4K9M1U5 179 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 TCF21O43680 179 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 TRMUO75648 421 aaKnown RBP11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 ZNF682O95780 498 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 F13BP05160 661 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 CST2P09228 141 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 COX5BP10606 129 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 MSR1P21757 451 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 STOMP27105 288 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 AQP2P41181 271 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 GZMMP51124 257 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 RIN1Q13671 783 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 LRFN4Q6PJG9 635 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 NHLRC1Q6VVB1 395 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 ADCK1Q86TW2 530 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 SYT14Q8NB59 555 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 OR1J1Q8NGS3 322 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 TMEM255BQ8WV15 326 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 MCUR1Q96AQ8 359 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 MS4A3Q96HJ5 214 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 SNX18Q96RF0 628 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 SYT3Q9BQG1 590 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 PRSS27Q9BQR3 290 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 SAP30LQ9HAJ7 183 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 MEPEQ9NQ76 525 aaPredicted RBP11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 TAAR3PQ9P1P4 343 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
SNORD88B-201ENST00000408454 IGLV3-9A0A075B6K5 115 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 FXYD1O00168 92 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 CXCR6O00574 342 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 PHF1O43189 567 aaPredicted RBP11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 PPIHO43447 177 aaKnown RBP11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 IGHV3-13P01766 116 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 TSPAN19P0C672 248 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 TNFRSF1AP19438 455 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 CCNOP22674 350 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 CPT2P23786 658 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 RGS6P49758 472 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 MNAT1P51948 309 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 SLC7A2P52569 658 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 CTXN1P60606 82 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 MYBPC1Q00872 1141 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 SGCAQ16586 387 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 CR1LQ2VPA4 569 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 SPATS1Q496A3 300 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 ARMC4Q5T2S8 1044 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 WDR88Q6ZMY6 472 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 MBOAT2Q6ZWT7 520 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 RBM45Q8IUH3 476 aaKnown RBP11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 LRRC17Q8N6Y2 441 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 ICA1LQ8NDH6 482 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 OR5L1Q8NGL2 311 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 ZNF347Q96SE7 839 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 SH3GL3Q99963 347 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 KCTD14Q9BQ13 255 aaPredicted RBP11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 TPK1Q9H3S4 243 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 SEC61A2Q9H9S3 476 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 SPAG4Q9NPE6 437 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 ATPIF1Q9UII2 106 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 ADAM21Q9UKJ8 722 aa11.05□□□□□ -0.64
SNORD88B-201ENST00000408454 CSPG4Q6UVK1 2322 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 IGHV1-69-2A0A0G2JMI3 117 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 TMEM129A0AVI4 362 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 J3QLI3 93 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 LY6HO94772 140 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 LYPD3O95274 346 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 MSMBP08118 114 aa11.04□□□□□ -0.64
SNORD88B-201ENST00000408454 COX4I1P13073 169 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms