RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 CYB561D1Q8N8Q1 229 aa3.67□□□□□ -1.82
PTPN12-202ENST00000407343 N4BP2L2Q92802 583 aaPredicted RBP3.67□□□□□ -1.82
PTPN12-202ENST00000407343 BMFQ96LC9 184 aa3.67□□□□□ -1.82
PTPN12-202ENST00000407343 OR2A5Q96R48 311 aa3.67□□□□□ -1.82
PTPN12-202ENST00000407343 NUP58Q9BVL2 599 aa3.67□□□□□ -1.82
PTPN12-202ENST00000407343 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
PTPN12-202ENST00000407343 RRP15Q9Y3B9 282 aaKnown RBP3.67□□□□□ -1.82
PTPN12-202ENST00000407343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.66□□□□□ -1.82
PTPN12-202ENST00000407343 IGKV2D-24A0A075B6R9 120 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 IGHV5-51A0A0C4DH38 117 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 HEATR9A2RTY3 570 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 FAM47DPA6NHR8 397 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 OR2AG2A6NM03 316 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 INS-IGF2F8WCM5 200 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 AP3B1O00203 1094 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 RAB29O14966 203 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 AIREO43918 545 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 CLIC3O95833 236 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 LONP1P36776 959 aaKnown RBP3.66□□□□□ -1.82
PTPN12-202ENST00000407343 MXD1Q05195 221 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 SLAQ13239 276 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 EIF4EBP1Q13541 118 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-202ENST00000407343 CCDC183Q5T5S1 534 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 OR7G2Q8NG99 324 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 ACMSDQ8TDX5 336 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 EXOSC8Q96B26 276 aaKnown RBP3.66□□□□□ -1.82
PTPN12-202ENST00000407343 FAM3DQ96BQ1 224 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 STARD4Q96DR4 205 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 PKNOX2Q96KN3 472 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 TSNARE1Q96NA8 513 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 ANKRA2Q9H9E1 313 aa3.66□□□□□ -1.82
PTPN12-202ENST00000407343 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 LRCOL1A6NCL2 159 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 DPM1O60762 260 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 SRP72O76094 671 aaKnown RBP3.65□□□□□ -1.83
PTPN12-202ENST00000407343 PABPC4LP0CB38 370 aaKnown RBP3.65□□□□□ -1.83
PTPN12-202ENST00000407343 MAS1LP35410 378 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 TMED10P49755 219 aaKnown RBP3.65□□□□□ -1.83
PTPN12-202ENST00000407343 CDH6P55285 790 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 IDI1Q13907 227 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 HES5Q5TA89 166 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 PRAMEF20Q5VT98 475 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 SLC8B1Q6J4K2 584 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 DNAJC24Q6P3W2 148 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 ZNF695Q8IW36 515 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 OR10J6PQ8NGY7 276 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 CXorf40AQ8TE69 158 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 CCDC77Q9BR77 488 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 NMRK1Q9NWW6 199 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 ZNF629Q9UEG4 869 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-202ENST00000407343 ST3GAL6Q9Y274 331 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 COL4A4P53420 1690 aaPredicted RBP3.65□□□□□ -1.83
PTPN12-202ENST00000407343 CAMTA1Q9Y6Y1 1673 aa3.65□□□□□ -1.83
PTPN12-202ENST00000407343 CDC7O00311 574 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 PRPS2P11908 318 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 TNNI1P19237 187 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 HMGN5P82970 282 aaKnown RBP3.64□□□□□ -1.83
PTPN12-202ENST00000407343 CLINT1Q14677 625 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 MRPL23Q16540 153 aaKnown RBP3.64□□□□□ -1.83
PTPN12-202ENST00000407343 ANKRD22Q5VYY1 191 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 IGFL3Q6UXB1 125 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 CERS6Q6ZMG9 384 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 HDDC2Q7Z4H3 204 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 NOXO1Q8NFA2 376 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 OR56B2PQ8NGI1 322 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 SLC29A1Q99808 456 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 NECAP2Q9NVZ3 263 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 RABL2BQ9UNT1 228 aa3.64□□□□□ -1.83
PTPN12-202ENST00000407343 AKNAQ7Z591 1439 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 IGHV3-74A0A0B4J1X5 117 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 GLYATL1P3A0A0U1RQE8 302 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 TRIM64CA6NLI5 447 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 DYNC1I1O14576 645 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 MAGEB4O15481 346 aaPredicted RBP3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CHST1O43916 411 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 DFNA5O60443 496 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 ENTPD5O75356 428 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 SPAG7O75391 227 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 ZNF250P15622 560 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 GPX4P36969 197 aaPredicted RBP3.63□□□□□ -1.83
PTPN12-202ENST00000407343 NAA10P41227 235 aaPredicted RBP3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CDKN2BP42772 138 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CYB561P49447 251 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 ECH1Q13011 328 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 SRSF5Q13243 272 aaKnown RBP3.63□□□□□ -1.83
PTPN12-202ENST00000407343 ZSCAN26Q16670 478 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 Q5W150 140 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 LRRC66Q68CR7 880 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CEMP1Q6PRD7 247 aaPredicted RBP3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CCDC73Q6ZRK6 1079 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 ABHD13Q7L211 337 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 LIX1Q8N485 282 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CREB3L1Q96BA8 519 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 CCDC126Q96EE4 140 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 OPN4Q9UHM6 478 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 IGSF9BQ9UPX0 1349 aa3.63□□□□□ -1.83
PTPN12-202ENST00000407343 RNF13O43567 381 aa3.62□□□□□ -1.83
PTPN12-202ENST00000407343 RP2O75695 350 aa3.62□□□□□ -1.83
PTPN12-202ENST00000407343 ANXA5P08758 320 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms