RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ZNF141Q15928 474 aa11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 SLC18B1Q6NT16 456 aa11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 MAMDC2Q7Z304 686 aaPredicted RBP11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 MIB2Q96AX9 1013 aa11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 LCORQ96JN0 433 aaPredicted RBP11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 LMF2Q9BU23 707 aaKnown RBP11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 WBP1LQ9NX94 342 aa11.46□□□□□ -0.58
PPP4R1-202ENST00000400555 NCOR1O75376 2440 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 ARPC3O15145 178 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 CYB5AP00167 134 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 ITGA5P08648 1049 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 RAB40ALP0C0E4 278 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 CTLA4P16410 223 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 POU3F1Q03052 451 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 EGR4Q05215 589 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 ELOCQ15369 112 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 CCDC157Q569K6 752 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 DCAF12L2Q5VW00 463 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 RHOUQ7L0Q8 258 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 MUC20Q8N307 709 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 RAB40AQ8WXH6 277 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 TCTN2Q96GX1 697 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 GPR137Q96N19 417 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 C12orf4Q9NQ89 552 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 COMMD9Q9P000 198 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 MED11Q9P086 117 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 STEAP1Q9UHE8 339 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 NPIPA5E9PKD4 350 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 F5H5P2 479 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 PNPP00491 289 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 PLATP00750 562 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 VSIG10L2P0DP72 767 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 IL11P20809 199 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 AANATQ16613 207 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 ARMC10Q8N2F6 343 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 MRPL38Q96DV4 380 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 SORCS2Q96PQ0 1159 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 C7orf50Q9BRJ6 194 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 NPIPA1Q9UND3 350 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 TMEM14AQ9Y6G1 99 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 LMX1BO60663 402 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 AKR1C2P52895 323 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 AKR1C1Q04828 323 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 FAM69BQ5VUD6 431 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 STEAP1BQ6NZ63 245 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 BEST3Q8N1M1 668 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 GPER1Q99527 375 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 JAM3Q9BX67 310 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 CLEC1BQ9P126 229 aa11.45□□□□□ -0.58
PPP4R1-202ENST00000400555 PHF3Q92576 2039 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 TMED7-TICAM2A0A0A6YYA0 188 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 TMEM269A0A1B0GVZ9 245 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 C5orf51A6NDU8 294 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 OR4C45A6NMZ5 311 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 UPK3AO75631 287 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 NSA2O95478 260 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ALOX5APP20292 161 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 DLX5P56178 289 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 SLC35D3Q5M8T2 416 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 HACD4Q5VWC8 232 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 GLDNQ6ZMI3 551 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ATG4DQ86TL0 474 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 POFUT1Q9H488 388 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 TMED7Q9Y3B3 224 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 VPS13AQ96RL7 3174 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 GGT3PA6NGU5 568 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 IFNA6P05013 189 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 IFNGR1P15260 489 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 CXADRP78310 365 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 MRPS21P82921 87 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 MFGE8Q08431 387 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 CLPPQ16740 277 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 GLT8D1Q68CQ7 371 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 DCXRQ7Z4W1 244 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 PTPMT1Q8WUK0 201 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 RBPMSQ93062 196 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ANKRD10Q9NXR5 420 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ZNF230Q9UIE0 474 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 RP1L1Q8IWN7 2480 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 H2BFMP0C1H6 154 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 AKAIN1P0CW23 69 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 PGCP20142 388 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ACHEP22303 614 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 NUP62P37198 522 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 SERTAD2Q14140 314 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 RBMS2Q15434 407 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 KCTD18Q6PI47 426 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 TSSK4Q6SA08 328 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 NUP54Q7Z3B4 507 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 GRAMD2AQ8IUY3 354 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ZNF440Q8IYI8 595 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 TEX19Q8NA77 164 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 ZNF426Q9BUY5 554 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 LMAN1LQ9HAT1 526 aa11.44□□□□□ -0.58
PPP4R1-202ENST00000400555 KLRF1Q9NZS2 232 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms