RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FAM32AQ9Y421 112 aaKnown RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 ATRQ13535 2644 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 IGKV1D-43A0A0B4J1Z2 117 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 IQCMA0A1B0GVH7 501 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 M0R233 179 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 CDC42EP2O14613 210 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 IGFBP1P08833 259 aaPredicted RBP12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 NR4A2P43354 598 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 GPR4P46093 362 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 GYS2P54840 703 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 PLP2Q04941 152 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 TBC1D28Q2M2D7 210 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 SAMD4BQ5PRF9 694 aaKnown RBP12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 TBPL2Q6SJ96 375 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 FOXL2NBQ6ZUU3 175 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 IGFN1Q86VF2 1251 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 LRRC18Q8N456 261 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 RNF148Q8N7C7 305 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 ARIH2OSQ8N7S6 290 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 ZNF540Q8NDQ6 660 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 DHRS1Q96LJ7 313 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 TSPAN32Q96QS1 320 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 NDEL1Q9GZM8 345 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 KCNN2Q9H2S1 579 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 MS4A5Q9H3V2 200 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 CDH20Q9HBT6 801 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 NDE1Q9NXR1 346 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 TAGLN3Q9UI15 199 aa12.8□□□□□ -0.36
SMIM11A-203ENST00000399299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 MXRA5Q9NR99 2828 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 CD14P08571 375 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 ADRA2AP08913 450 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 ITGA2P17301 1181 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 GIFP27352 417 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 CDAP32320 146 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 SPATS1Q496A3 300 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 ZBED5Q49AG3 693 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 C6orf52Q5T4I8 152 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 FAM27BQ5VT28 67 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 FAM86B1Q8N7N1 296 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 BCL2L14Q9BZR8 327 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 LRMDAQ9H2I8 198 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 CCNB1IP1Q9NPC3 277 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 CD300AQ9UGN4 299 aa12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 ANK3Q12955 4377 aaKnown RBP12.79□□□□□ -0.36
SMIM11A-203ENST00000399299 SH3PXD2BA1X283 911 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 AHCYL1O43865 530 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 SEMG1P04279 462 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 CST2P09228 141 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 DAOP14920 347 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 APLNRP35414 380 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 LIMS1P48059 325 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 HSF2Q03933 536 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 IQCCQ4KMZ1 466 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 FGD3Q5JSP0 725 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 RGS7BPQ6MZT1 257 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 PODNL1Q6PEZ8 512 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 FAM122BQ7Z309 247 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 ZNF786Q8N393 782 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 NSMAFQ92636 917 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 PYURFQ96I23 114 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 FAM46AQ96IP4 442 aaKnown RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 FOXN4Q96NZ1 517 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 GPX7Q96SL4 187 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 KRCC1Q9NPI7 259 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 YAE1D1Q9NRH1 226 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 ARL8BQ9NVJ2 186 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 GRHPRQ9UBQ7 328 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 SIGLEC7Q9Y286 467 aa12.78□□□□□ -0.36
SMIM11A-203ENST00000399299 IGLV3-9A0A075B6K5 115 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 TRBV4-1A0A0J9YWV2 114 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 NDUFB2O95178 105 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 STAMBPO95630 424 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 IGHV4-31P0DP07 118 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 CCL2P13500 99 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF250P15622 560 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF32P17041 273 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 TCN1P20061 433 aaPredicted RBP12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 APEX1P27695 318 aaKnown RBP12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 GUCA1AP43080 201 aaPredicted RBP12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 RAD52P43351 418 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 OMPP47874 163 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 GZMKP49863 264 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 MNAT1P51948 309 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 SMIM11AP58511 58 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 ERVK-25P63136 954 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 GGTLC2Q14390 218 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 KRT72Q14CN4 511 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 CARTPTQ16568 116 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 SGCAQ16586 387 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 PABPC1L2AQ5JQF8 200 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 C16orf89Q6UX73 402 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 LRP11Q86VZ4 500 aa12.77□□□□□ -0.37
SMIM11A-203ENST00000399299 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms