RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC22A23A1A5C7 686 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PRSS37A4D1T9 235 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TRIM64A6NGJ6 449 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TRIM64BA6NI03 449 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SOCS2O14508 198 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 XKRYO14609 159 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DNAJC8O75937 253 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 STAMBPO95630 424 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IGHV4-39P01824 125 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SERPINA5P05154 406 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR4A8P0C604 315 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NR2C1P13056 603 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CCL2P13500 99 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF35P13682 527 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FPR3P25089 353 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SDHAP31040 664 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DBPQ10586 325 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ADIPOQQ15848 244 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC36A2Q495M3 483 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NRN1LQ496H8 165 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DPY19L2P2Q6ZN68 376 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PTCHD4Q6ZW05 846 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ADGRG5Q8IZF4 528 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR4F15Q8NGB8 312 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR4C15Q8NGM1 316 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FANK1Q8TC84 345 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CANT1Q8WVQ1 401 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FOXN4Q96NZ1 517 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CADM1Q9BY67 442 aaKnown RBP12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DENND2DQ9H6A0 471 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DLL4Q9NR61 685 aa12.19□□□□□ -0.46
HLA-DQB1-202ENST00000399079 A0A1W2PPL8 197 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GSC2O15499 205 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ENTPD5O75356 428 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PPP1R3DO95685 299 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GASTP01350 101 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SCG5P05408 212 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MMP7P09237 267 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RAP2AP10114 183 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CTLA4P16410 223 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 LAP3P28838 519 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 THBS4P35443 961 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SERPINF1P36955 418 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IFNGR2P38484 337 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GSSP48637 474 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SNTB2Q13425 540 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 KRR1Q13601 381 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DAG1Q14118 895 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FLOT2Q14254 428 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RFX4Q33E94 735 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OTPQ5XKR4 325 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR2T5Q6IEZ7 315 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF770Q6IQ21 691 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PAQR4Q8N4S7 273 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NUP37Q8NFH4 326 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR2T29Q8NH02 315 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FNDC8Q8TC99 324 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GNPDA2Q8TDQ7 276 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SAMD8Q96LT4 415 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ERMAPQ96PL5 475 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CHID1Q9BWS9 393 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TRIM15Q9C019 465 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NDEL1Q9GZM8 345 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SYT4Q9H2B2 425 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RERGLQ9H628 205 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 POMPQ9Y244 141 aa12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SAMHD1Q9Y3Z3 626 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RTTNQ86VV8 2226 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DHRS12A0PJE2 317 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GPRIN2O60269 458 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF32P17041 273 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NPR2P20594 1047 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NR4A1P22736 598 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CDKN2AP42771 156 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TSPAN31Q12999 210 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FAM27BQ5VT28 67 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GPR139Q6DWJ6 353 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TMEM53Q6P2H8 277 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC30A7Q8NEW0 376 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 EGLN3Q9H6Z9 239 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 REEP1Q9H902 201 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC7A8Q9UHI5 535 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZFHX3Q15911 3703 aa12.17□□□□□ -0.46
HLA-DQB1-202ENST00000399079 AQP12BA6NM10 295 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MGRN1O60291 552 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC16A7O60669 478 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CCNB2O95067 398 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CST1P01037 141 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 APEX1P27695 318 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RPS6KA3P51812 740 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RAB35Q15286 201 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MSMPQ1L6U9 139 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MICAQ29983 383 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PABPC1L2AQ5JQF8 200 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CLEC12AQ5QGZ9 265 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms