RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CDKN2AP42771 156 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-203ENST00000396832 RPS21P63220 83 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-203ENST00000396832 ZNF684Q5T5D7 378 aa21.75■■□□□ 1.07
CSNK1E-203ENST00000396832 LIN54Q6MZP7 749 aa21.75■■□□□ 1.07
CSNK1E-203ENST00000396832 LRFN5Q96NI6 719 aa21.75■■□□□ 1.07
CSNK1E-203ENST00000396832 MYEF2Q9P2K5 600 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-203ENST00000396832 FANCMQ8IYD8 2048 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 NR0B1P51843 470 aaKnown RBP21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 MGAT2Q10469 447 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 PDZK1IP1Q13113 114 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 ALKBH1Q13686 389 aaKnown RBP21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 C10orf91Q5T1B1 145 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 LIPNQ5VXI9 398 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 ABHD13Q7L211 337 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 SAMD14Q8IZD0 417 aaPredicted RBP21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 PAQR8Q8TEZ7 354 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 PPP1R1CQ8WVI7 109 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 RERGQ96A58 199 aaPredicted RBP21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 CCDC74AQ96AQ1 378 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 LMF1Q96S06 567 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 MKKSQ9NPJ1 570 aaPredicted RBP21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 LRIT1Q9P2V4 623 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 CARHSP1Q9Y2V2 147 aaKnown RBP21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 OR2AT4A6NND4 320 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 SNAPINO95295 136 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 ATP1B3P54709 279 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 GPR18Q14330 331 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 OR1J4Q8NGS1 313 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 EDAQ92838 391 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 PTDSS2Q9BVG9 487 aa21.74■■□□□ 1.07
CSNK1E-203ENST00000396832 GPR89AB7ZAQ6 455 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 HNRNPA1P09651 372 aaKnown RBP eCLIP21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 GPR89BP0CG08 455 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 CD34P28906 385 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 CASRP41180 1078 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 ADPRHP54922 357 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 POMZP3Q6PJE2 187 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 LRRC69Q6ZNQ3 347 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 SLC16A13Q7RTY0 426 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 FAM122BQ7Z309 247 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 GTPBP8Q8N3Z3 284 aaPredicted RBP21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 NT5CQ8TCD5 201 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 MBD2Q9UBB5 411 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 NOP16Q9Y3C1 178 aaKnown RBP21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 M0QYG6 137 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 DOK2O60496 412 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 RAB3DO95716 219 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 WNT11O96014 354 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 DHRS2Q13268 280 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 RXFP3Q9NSD7 469 aa21.73■■□□□ 1.07
CSNK1E-203ENST00000396832 CYR61O00622 381 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 TACSTD2P09758 323 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 PTGFRP43088 359 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 NR0B2Q15466 257 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 SLC35D3Q5M8T2 416 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 C3orf33Q6P1S2 294 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 ZNF813Q6ZN06 617 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 SLC43A2Q8N370 569 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 OR9A4Q8NGU2 314 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 OR4C3Q8NH37 302 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 FLVCR1-AS1Q8TAF5 88 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 ADAD1Q96M93 576 aaKnown RBP21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 STACQ99469 402 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 ZNF426Q9BUY5 554 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 TMEM231Q9H6L2 316 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 CFAP54Q96N23 3096 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 TRBV5-5A0A0J9YX44 114 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 UPK3AO75631 287 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 MELTFP08582 738 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 SMIM10L1P0DMW3 83 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 POU3F4P49335 361 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 SNRPEP62304 92 aaKnown RBP21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 PLEKHN1Q494U1 663 aaPredicted RBP21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 FAM220AQ7Z4H9 259 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 TMEM106AQ96A25 262 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 SMIM10Q96HG1 83 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 CNTNAP3BQ96NU0 1288 aa21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 ELF4Q99607 663 aaPredicted RBP21.72■■□□□ 1.07
CSNK1E-203ENST00000396832 PRR19A6NJB7 356 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 ZNF806P0C7X5 589 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 LIPCP11150 499 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 NFYBP25208 207 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 CAPZA1P52907 286 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 PNLIPRP2P54317 469 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 INPP5JQ15735 1006 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 VWA2Q5GFL6 755 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 TM4SF19Q96DZ7 209 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 KXD1Q9BQD3 176 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 POTEKPQ9BYX7 375 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 PLA2G2FQ9BZM2 168 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 TINAGL1Q9GZM7 467 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 TREM1Q9NP99 234 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 GSN-AS1Q9NRJ2 163 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 MRM2Q9UI43 246 aaKnown RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 PLEKHA6Q9Y2H5 1048 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 SULT2B1O00204 365 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 FGF16O43320 207 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 KCNAB3O43448 404 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 C5AR1P21730 350 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 SCAND1P57086 179 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms