RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LRRC18Q8N456 261 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 SLC30A7Q8NEW0 376 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 OR13C2Q8NGS9 318 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 OR51A7Q8NH64 312 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 SLC7A13Q8TCU3 470 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 HIST1H2ACQ93077 130 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 POM121L2Q96KW2 1035 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 RACGAP1Q9H0H5 632 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 RAB1BQ9H0U4 201 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 WNT5BQ9H1J7 359 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 OR51B6Q9H340 312 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 DENND2DQ9H6A0 471 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-205ENST00000394892 REV1Q9UBZ9 1251 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 KCNS2Q9ULS6 477 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 ADAM18Q9Y3Q7 739 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 FKBP7Q9Y680 259 aa7.58□□□□□ -1.2
ATG4A-205ENST00000394892 IGLV3-9A0A075B6K5 115 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 A0A1W2PRG6 482 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 CENPBD1B2RD01 187 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 MCIDASD6RGH6 385 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 H7C1C5 153 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 PTP4A3O75365 173 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 DIRAS1O95057 198 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ZNF682O95780 498 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 IFNA14P01570 189 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NAT2P11245 290 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ZNF250P15622 560 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ZNF32P17041 273 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 MPV17P39210 176 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 MAGEB1P43366 347 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 GPR4P46093 362 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 LIMS1P48059 325 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 CTXN1P60606 82 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 PSME3P61289 254 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 RPL27P61353 136 aaKnown RBP7.57□□□□□ -1.2
ATG4A-205ENST00000394892 LCN6P62502 163 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ERVK-25P63136 954 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 PSG4Q00888 419 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ST3GAL3Q11203 375 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ALKBH6Q3KRA9 238 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NRN1LQ496H8 165 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ALG10Q5BKT4 473 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 PABPC1L2AQ5JQF8 200 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 FAM166AQ6J272 317 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 MBOAT2Q6ZWT7 520 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 SLC16A14Q7RTX9 510 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 FAM122BQ7Z309 247 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 RNF148Q8N7C7 305 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 FAM156AQ8NDB6 213 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 AKR7LQ8NHP1 331 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 UBASH3BQ8TF42 649 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NEU4Q8WWR8 484 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NSMAFQ92636 917 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 HOPXQ9BPY8 73 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-205ENST00000394892 PIMREGQ9BSJ6 248 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NMNAT1Q9HAN9 279 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-205ENST00000394892 SIAEQ9HAT2 523 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 MED4Q9NPJ6 270 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 MRGBPQ9NV56 204 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NDUFAF4Q9P032 175 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 ENPP4Q9Y6X5 453 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 NBEAL1Q6ZS30 2694 aa7.57□□□□□ -1.2
ATG4A-205ENST00000394892 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 LOC100289279A0A1B0GTE1 492 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 EFCAB9A8MZ26 197 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 M0R233 179 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 SNX3O60493 162 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 CCDC22O60826 627 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 SNAP29O95721 258 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 NGFP01138 241 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 SEMG1P04279 462 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 IFNW1P05000 195 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 APEHP13798 732 aaKnown RBP7.56□□□□□ -1.2
ATG4A-205ENST00000394892 LAP3P28838 519 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 MSX2P35548 267 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-205ENST00000394892 OMPP47874 163 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 NUDT2P50583 147 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 DAP3P51398 398 aaKnown RBP7.56□□□□□ -1.2
ATG4A-205ENST00000394892 UCP2P55851 309 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 TRAM2Q15035 370 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 SGCAQ16586 387 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 IFI44LQ53G44 452 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 MESTQ5EB52 335 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 FAM27BQ5VT28 67 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 TMPRSS11FQ6ZWK6 438 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 ARPINQ7Z6K5 226 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 GEMIN6Q8WXD5 167 aaKnown RBP7.56□□□□□ -1.2
ATG4A-205ENST00000394892 ACOT11Q8WXI4 607 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-205ENST00000394892 DHRS1Q96LJ7 313 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 Q96M85 177 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 SNX18Q96RF0 628 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 ALG12Q9BV10 488 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 FNDC11Q9BVV2 318 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
ATG4A-205ENST00000394892 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms