RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 WIF1Q9Y5W5 379 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 OR52A4PA6NMU1 304 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 RD3LP0DJH9 198 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 CSRP1P21291 193 aaKnown RBP17.12■□□□□ 0.33
HOXC6-202ENST00000394331 PTGER1P34995 402 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 MAGEB1P43366 347 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 CDX1P47902 265 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-202ENST00000394331 RPS21P63220 83 aaKnown RBP17.12■□□□□ 0.33
HOXC6-202ENST00000394331 LTBQ06643 244 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 TDGQ13569 410 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 ELAVL1Q15717 326 aaKnown RBP17.12■□□□□ 0.33
HOXC6-202ENST00000394331 TANGO2Q6ICL3 276 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 RFLNBQ8N5W9 214 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF383Q8NA42 475 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 MFSD9Q8NBP5 474 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 NUP43Q8NFH3 380 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 PDCD1LG2Q9BQ51 273 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 CHST5Q9GZS9 411 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 TMEM72A0PK05 275 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 FBXO24O75426 580 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 C8orf89P0DMQ9 161 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 FCARP24071 287 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 DUSP2Q05923 314 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 CRMP1Q14194 572 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 NECAB3Q96P71 396 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-202ENST00000394331 SSX3Q99909 188 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 ACTRT3Q9BYD9 372 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 CYTL1Q9NRR1 136 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF780BQ9Y6R6 833 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 PRR19A6NJB7 356 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 TAS2R19P59542 299 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 ALKBH1Q13686 389 aaKnown RBP17.11■□□□□ 0.33
HOXC6-202ENST00000394331 ENPP2Q13822 863 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 AWAT2Q6E213 333 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 STAC2Q6ZMT1 411 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 TMEM229BQ8NBD8 167 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 OR4K17Q8NGC6 315 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 OR10R2Q8NGX6 335 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 LURAP1Q96LR2 239 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 DPH1Q9BZG8 443 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 PARPBPQ9NWS1 579 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 SLC7A7Q9UM01 511 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 KCNE3Q9Y6H6 103 aa17.11■□□□□ 0.33
HOXC6-202ENST00000394331 CD3DP04234 171 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 APODP05090 189 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 NDUFB7P17568 137 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 CEBPEQ15744 281 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 CNN2Q99439 309 aaKnown RBP17.1■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF107Q9UII5 783 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-202ENST00000394331 HEATR5BQ9P2D3 2071 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 IFNA17P01571 189 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 TMIGD3P0DMS9 266 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-202ENST00000394331 MC3RP41968 323 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 TOMM20Q15388 145 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 YAF2Q8IY57 180 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 GABRG1Q8N1C3 465 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 OR2L13Q8N349 312 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 OR1J2Q8NGS2 313 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 ADAMTS17Q8TE56 1095 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 CPNE2Q96FN4 548 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-202ENST00000394331 CDC6Q99741 560 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 PRSS27Q9BQR3 290 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 HEBP2Q9Y5Z4 205 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 A6NLC8 198 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 FCGR3AP08637 254 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 HPGDP15428 266 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 PAX1P15863 534 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 NRROSQ86YC3 692 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 SNX33Q8WV41 574 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 TMED6Q8WW62 240 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 NTNG1Q9Y2I2 539 aa17.1■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3DA0A087WVF3 549 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3IA0A087WXS9 549 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3EA0A087X179 549 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3KA0A087X1G2 549 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3FA6NER0 549 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3LB9A6J9 549 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF208O43345 1280 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 CLUP10909 449 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 MAKP20794 623 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 DVL1P1P54792 670 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-202ENST00000394331 GPM6BQ13491 265 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 NSUN5P2Q63ZY6 315 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3CQ6IPX1 549 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 TBC1D3Q8IZP1 549 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-202ENST00000394331 OR9A2Q8NGT5 310 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 OR4C6Q8NH72 309 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 GPX8Q8TED1 209 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 ZBTB8AQ96BR9 441 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 DUSP15Q9H1R2 295 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-202ENST00000394331 RPS10P5Q9NQ39 176 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 APOBEC3BQ9UH17 382 aaKnown RBP17.09■□□□□ 0.33
HOXC6-202ENST00000394331 NOP16Q9Y3C1 178 aaKnown RBP17.09■□□□□ 0.33
HOXC6-202ENST00000394331 COLEC10Q9Y6Z7 277 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 METTL21EPA6NDL7 271 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 DUXAA6NLW8 204 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 P2RX6O15547 441 aa17.09■□□□□ 0.33
HOXC6-202ENST00000394331 IL2RAP01589 272 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms