RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 ANKHD1Q8IWZ3 2542 aaKnown RBP13.05□□□□□ -0.32
SUMO1-203ENST00000392246 ARPC4-TTLL3A0A0A6YYG9 625 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 A0A1W2PR80 420 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 SURF4O15260 269 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 PEX2P28328 305 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 CDAP32320 146 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
SUMO1-203ENST00000392246 CRMP1Q14194 572 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 SLX4IPQ5VYV7 408 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 FOXL2NBQ6ZUU3 175 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 WFDC8Q8IUA0 241 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 OR6V1Q8N148 313 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 PLEKHA8Q96JA3 519 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 SIAEQ9HAT2 523 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 NGBQ9NPG2 151 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 TVP23BQ9NYZ1 205 aa13.05□□□□□ -0.32
SUMO1-203ENST00000392246 COA3Q9Y2R0 106 aaPredicted RBP13.05□□□□□ -0.32
SUMO1-203ENST00000392246 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
SUMO1-203ENST00000392246 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
SUMO1-203ENST00000392246 A0A1W2PPL8 197 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 DCTN6O00399 190 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 PAICSP22234 425 aaKnown RBP13.04□□□□□ -0.32
SUMO1-203ENST00000392246 CRYGSP22914 178 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 LAP3P28838 519 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 CAPZA2P47755 286 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 SLC25A1P53007 311 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 RIPK1Q13546 671 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 SNAPC1Q16533 368 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 SGCAQ16586 387 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 ZIK1Q3SY52 487 aaPredicted RBP13.04□□□□□ -0.32
SUMO1-203ENST00000392246 OGFRL1Q5TC84 451 aaPredicted RBP13.04□□□□□ -0.32
SUMO1-203ENST00000392246 ALKBH2Q6NS38 261 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 GALNT4Q8N4A0 578 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 PACRGLQ8N7B6 248 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 OR2T4Q8NH00 348 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 NANOS1Q8WY41 292 aaKnown RBP13.04□□□□□ -0.32
SUMO1-203ENST00000392246 RDH12Q96NR8 316 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 RACGAP1Q9H0H5 632 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 FN3KQ9H479 309 aa13.04□□□□□ -0.32
SUMO1-203ENST00000392246 MOV10Q9HCE1 1003 aaKnown RBP13.04□□□□□ -0.32
SUMO1-203ENST00000392246 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 CENPAP49450 140 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 GLO1Q04760 184 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 DAZAP2Q15038 168 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-203ENST00000392246 FAM27BQ5VT28 67 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 C12orf73Q69YU5 71 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 SLC16A14Q7RTX9 510 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 DPPA2Q7Z7J5 298 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 NABP1Q96AH0 204 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 NMNAT2Q9BZQ4 307 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 KCNN2Q9H2S1 579 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 TOR3AQ9H497 397 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 POLE4Q9NR33 117 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 PTPN13Q12923 2485 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 HEATR1Q9H583 2144 aaKnown RBP13.03□□□□□ -0.32
SUMO1-203ENST00000392246 PRR23D1E9PI22 279 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-203ENST00000392246 UBL3O95164 117 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 SNAP29O95721 258 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 HLA-HP01893 362 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 PRR23D2P0DMB1 279 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-203ENST00000392246 CD79AP11912 226 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 MSR1P21757 451 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 TUBA1BP68363 451 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 TUBA4AP68366 448 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 SLC36A2Q495M3 483 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 TUBA1AQ71U36 451 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 LRRC18Q8N456 261 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 PROKR2Q8NFJ6 384 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 OR9Q1Q8NGQ5 310 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 HTRA1Q92743 480 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 PTP4A1Q93096 173 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 OTULINQ96BN8 352 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 HRASLS5Q96KN8 279 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 VCXQ9H320 206 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 SMPD3Q9NY59 655 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-203ENST00000392246 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 ZNF224Q9NZL3 707 aa13.03□□□□□ -0.32
SUMO1-203ENST00000392246 FAM183AA6NL82 134 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 FAM171A2A8MVW0 826 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 GOSR1O95249 250 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 CBR1P16152 277 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 SPI1P17947 270 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 HSF2Q03933 536 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 PIGFQ07326 219 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 GSG1Q2KHT4 349 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 BEX5Q5H9J7 111 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 PLBD1Q6P4A8 553 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 CPOQ8IVL8 374 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 FAM169BQ8N8A8 192 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 TCEANCQ8N8B7 351 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 MBOAT4Q96T53 435 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 C1QTNF6Q9BXI9 259 aa13.02□□□□□ -0.33
SUMO1-203ENST00000392246 HINT3Q9NQE9 182 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms