RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ULBP3Q9BZM4 244 aa17.27■□□□□ 0.36
SMARCD1-201ENST00000381513 CRLF2Q9HC73 371 aa17.27■□□□□ 0.36
SMARCD1-201ENST00000381513 HAO2Q9NYQ3 351 aa17.27■□□□□ 0.36
SMARCD1-201ENST00000381513 MSRAQ9UJ68 235 aa17.27■□□□□ 0.36
SMARCD1-201ENST00000381513 CLEC4EQ9ULY5 219 aa17.27■□□□□ 0.36
SMARCD1-201ENST00000381513 A0A1B0GV50 99 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 PPP1R2P9O14990 202 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 CDC40O60508 579 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 OR2C1O95371 312 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 TSPAN15O95858 294 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ERV3-1Q14264 604 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 OR1Q1Q15612 314 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 FAM220AQ7Z4H9 259 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 PAQR4Q8N4S7 273 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 OR9A2Q8NGT5 310 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ROBO4Q8WZ75 1007 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 SLC6A7Q99884 636 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 GPR62Q9BZJ7 368 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 PRSS16Q9NQE7 514 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 VSIG4Q9Y279 399 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ALPK2Q86TB3 2170 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 SRPX2O60687 465 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 FABP4P15090 132 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 DUSP2Q05923 314 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 TFGQ92734 400 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 C2orf88Q9BSF0 95 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 TMED7Q9Y3B3 224 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 CENPVL1A0A0U1RR11 272 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ELOA3DA6NLF2 546 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 UMAD1C9J7I0 102 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 CYTIPO60759 359 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 C6P13671 934 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 PMELP40967 661 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 LSM6P62312 80 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ZNF616Q08AN1 781 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 GRB14Q14449 540 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 MEF2DQ14814 521 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 HMGN3Q15651 99 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ELOA3BQ3SY89 546 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 GFI1BQ5VTD9 330 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 MAMDC2Q7Z304 686 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 TMCO2Q7Z6W1 182 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ARL6IP6Q8N6S5 226 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ELOA3Q8NG57 546 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 DOK4Q8TEW6 326 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ASB17Q8WXJ9 295 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 NKD1Q969G9 470 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 ZNF426Q9BUY5 554 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 TAF9BQ9HBM6 251 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 GTF2A1LQ9UNN4 478 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 IER3IP1Q9Y5U9 82 aa17.26■□□□□ 0.35
SMARCD1-201ENST00000381513 NPIPA5A0A0B4J1W7 369 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 NPIPA7E9PJI5 369 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ZIC2O95409 532 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 FCGR3AP08637 254 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 NPIPA8P0DM63 369 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 RPL7L1Q6DKI1 246 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 SLC16A11Q8NCK7 471 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 SLC25A36Q96CQ1 311 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 TCTN2Q96GX1 697 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 JSRP1Q96MG2 331 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 MESP1Q9BRJ9 268 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 PUS1Q9Y606 427 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 URGCP-MRPS24S4R325 110 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 TBC1D3EA0A087X179 549 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 PSMB5P28074 263 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 SLC6A6P31641 620 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 DHCR24Q15392 516 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 C2orf76Q3KRA6 126 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 FAM46CQ5VWP2 391 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ARHGAP11AQ6P4F7 1023 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 KLHDC8AQ8IYD2 350 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ADAMTS17Q8TE56 1095 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 SMIM8Q96KF7 97 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 KIF26AQ9ULI4 1882 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 EIF1AYO14602 144 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 TBX19O60806 448 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ERCC1P07992 297 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 EIF1AXP47813 144 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 RAP1AP62834 184 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ELOCQ15369 112 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ALG11Q2TAA5 492 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 DNM1P46Q6ZS02 220 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 OR1J1Q8NGS3 322 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 OR13C8Q8NGS7 320 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 OR10AC1Q8NH08 325 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 ZNRF4Q8WWF5 429 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 CDS1Q92903 461 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 CNRIP1Q96F85 164 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 NMNAT3Q96T66 252 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 S100A13Q99584 98 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 TUBA4BQ9H853 241 aa17.25■□□□□ 0.35
SMARCD1-201ENST00000381513 FITM1A5D6W6 292 aa17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 IFNA10P01566 189 aa17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 CD70P32970 193 aa17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 LMAN2Q12907 356 aa17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 RNASE10Q5GAN6 216 aaKnown RBP17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 ALKBH2Q6NS38 261 aa17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 GPX8Q8TED1 209 aa17.24■□□□□ 0.35
SMARCD1-201ENST00000381513 TIFAQ96CG3 184 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms