RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SLC17A4Q9Y2C5 497 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 M6PRP20645 277 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 PMPCAQ10713 525 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 CDC20Q12834 499 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 GLIPR1L1Q6UWM5 242 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 CCDC190Q86UF4 302 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 LIX1LQ8IVB5 337 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 MISPQ8IVT2 679 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 SFTPA1Q8IWL2 248 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 FAM71CQ8NEG0 241 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 SULT4A1Q9BR01 284 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 TAS2R4Q9NYW5 299 aa15.67■□□□□ 0.1
SGCB-201ENST00000381431 A0A1W2PNR3 127 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 PRAMEF27A3QJZ7 478 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 STK17BO94768 372 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 TRAPPC2P0DI81 140 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 TRAPPC2BP0DI82 140 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 GABRB1P18505 474 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 PPICP45877 212 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 ESCO2Q56NI9 601 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 FCRL6Q6DN72 434 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 PRSS41Q7RTY9 318 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 STT3BQ8TCJ2 826 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 DCBLD2Q96PD2 775 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 AUNIPQ9H7T9 357 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 IL20Q9NYY1 176 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 CCL27Q9Y4X3 112 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 COL4A5P29400 1685 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 LOC107986453A0A1B0GWG9 222 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 IFITM5A6NNB3 132 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 PLRG1O43660 514 aaKnown RBP15.66■□□□□ 0.1
SGCB-201ENST00000381431 ALOX12BO75342 701 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 RAC2P15153 192 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 LUMP51884 338 aaPredicted RBP15.66■□□□□ 0.1
SGCB-201ENST00000381431 C12orf73Q69YU5 71 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 ADGRE4PQ86SQ3 457 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 OR4C3Q8NH37 302 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 METTL9Q9H1A3 318 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 CHRNA9Q9UGM1 479 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 ANKRD30BLA7E2S9 258 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 CTSVO60911 334 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 DDAH2O95865 285 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 MT-ATP6P00846 226 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 IGHV3-9P01782 118 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 SDHBP21912 280 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 TMEM201Q5SNT2 666 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 COMTD1Q86VU5 262 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 C20orf141Q9NUB4 165 aa15.66■□□□□ 0.1
SGCB-201ENST00000381431 A0A0D9SG52 128 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 H3BUI4 141 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SULT1B1O43704 296 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 ICOSLGO75144 302 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 MED6O75586 246 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 IL32P24001 234 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 PTBP1P26599 531 aaKnown RBP eCLIP15.65■□□□□ 0.1
SGCB-201ENST00000381431 GZMKP49863 264 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SSX1Q16384 188 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 FBXW12Q6X9E4 464 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 RFPL4BQ6ZWI9 263 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 BATF2Q8N1L9 274 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 ISYNA1Q9NPH2 558 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 ASH2LQ9UBL3 628 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 KCNG2Q9UJ96 466 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SCN3AQ9NY46 2000 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 A0A087WV62 115 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 NRG2O14511 850 aaPredicted RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 EIF4E2O60573 245 aaKnown RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 TK1P04183 234 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SNRNP70P08621 437 aaKnown RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 PTCRAQ6ISU1 281 aaPredicted RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 EDAQ92838 391 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 K7EPK0 472 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 LIMS3P0CW19 117 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 LIMS4P0CW20 117 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 P2RX1P51575 399 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SLC35A1P78382 337 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 NPSR1Q6W5P4 371 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SYS1Q8N2H4 156 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SLC43A2Q8N370 569 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 FAM71E2Q8N5Q1 922 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 CNEP1R1Q8N9A8 125 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 CPT1CQ8TCG5 803 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 NANOS1Q8WY41 292 aaKnown RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 SLC25A21Q9BQT8 299 aaPredicted RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 CDCP1Q9H5V8 836 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 GPATCH2Q9NW75 528 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 KLK11Q9UBX7 282 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 A0A0A6YYJ9 748 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 MYF5P13349 255 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 PPT1P50897 306 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 ARG2P78540 354 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 ACSM1Q08AH1 577 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 HNF4GQ14541 408 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 EBPQ15125 230 aaKnown RBP15.65■□□□□ 0.1
SGCB-201ENST00000381431 GAREM1Q9H706 876 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 FBXO34Q9NWN3 711 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 LRFN1Q9P244 771 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 SIT1Q9Y3P8 196 aa15.65■□□□□ 0.1
SGCB-201ENST00000381431 DOCK1Q14185 1865 aa15.64■□□□□ 0.09
SGCB-201ENST00000381431 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms