RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GLYATL3Q5SZD4 288 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-203ENST00000378037 SLC18B1Q6NT16 456 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF782Q6ZMW2 699 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-203ENST00000378037 OR5AS1Q8N127 324 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 DTWD2Q8NBA8 298 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 OR51E1Q8TCB6 317 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 DDIT4LQ96D03 193 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 C11orf54Q9H0W9 315 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-203ENST00000378037 KLK11Q9UBX7 282 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 RHBDD3Q9Y3P4 386 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 INMT-MINDY4F8WBC2 141 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 M0QYG6 137 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 SIX6O95475 246 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 IFNA6P05013 189 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 TMEM225BP0DP42 221 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 HOXB9P17482 250 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-203ENST00000378037 CYB561P49447 251 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 DGCR2P98153 550 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 FOXC1Q12948 553 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 MFAP5Q13361 173 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 FGFBP1Q14512 234 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 ATAD3CQ5T2N8 411 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 SFXN4Q6P4A7 337 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 DHRS4L2Q6PKH6 230 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 VASH1Q7L8A9 365 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-203ENST00000378037 TMEM17Q86X19 198 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 PELI1Q96FA3 418 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 NARS2Q96I59 477 aaKnown RBP7.31□□□□□ -1.24
CKAP2-203ENST00000378037 KLHL15Q96M94 604 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 ST6GALNAC5Q9BVH7 336 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 CACNG6Q9BXT2 260 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 MED28Q9H204 178 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 LANCL2Q9NS86 450 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 MED17Q9NVC6 651 aa7.31□□□□□ -1.24
CKAP2-203ENST00000378037 NUP210Q8TEM1 1887 aaPredicted RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 A0A087WV62 115 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 A0A1B0GV50 99 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 A8MVM7 634 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 UPK1BO75841 260 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 THBS1P07996 1170 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 MSX1P28360 303 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 GALNSP34059 522 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 CSNK1A1P48729 337 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 P2RX1P51575 399 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 POLR2HP52434 150 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 EFNA3P52797 238 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 STARD6P59095 220 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 CDK5Q00535 292 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 HSF1Q00613 529 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 TEKQ02763 1124 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 HSF2Q03933 536 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 KCTD18Q6PI47 426 aaPredicted RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 CADM3Q8N126 398 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 BEST3Q8N1M1 668 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ZFAND2BQ8WV99 257 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 SLC35B4Q969S0 331 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF566Q969W8 418 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 YIPF6Q96EC8 236 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 TSPAN32Q96QS1 320 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 PELOQ9BRX2 385 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 LMF2Q9BU23 707 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ERVMER34-1Q9H9K5 563 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 RANGRFQ9HD47 186 aaPredicted RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 CNOT2Q9NZN8 540 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF221Q9UK13 617 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 FZR1Q9UM11 496 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 FLNBO75369 2602 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 TRAV36DV7A0A075B6V5 113 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 SHISA3A0PJX4 238 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 IRGMA1A4Y4 181 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF879B4DU55 563 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ANGPTL7O43827 346 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 LMX1BO60663 402 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 CBFA2T3O75081 653 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 EIF4EP06730 217 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 LTBQ06643 244 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 LTC4SQ16873 150 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ALKBH6Q3KRA9 238 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 SLC36A2Q495M3 483 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 AWAT2Q6E213 333 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 GPR137CQ8N3F9 429 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 IL17RDQ8NFM7 739 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF721Q8TF20 911 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ABHD3Q8WU67 409 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 DHRS1Q96LJ7 313 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 GABARAPL1Q9H0R8 117 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 GSKIPQ9P0R6 139 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 EIF3KQ9UBQ5 218 aaKnown RBP7.3□□□□□ -1.24
CKAP2-203ENST00000378037 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 ZFHX4Q86UP3 3567 aa7.3□□□□□ -1.24
CKAP2-203ENST00000378037 A0A0G2JMM0 328 aa7.29□□□□□ -1.24
CKAP2-203ENST00000378037 CXorf51AA0A1B0GTR3 108 aa7.29□□□□□ -1.24
CKAP2-203ENST00000378037 A0A1W2PPB8 328 aa7.29□□□□□ -1.24
CKAP2-203ENST00000378037 A0A1W2PRS3 328 aa7.29□□□□□ -1.24
CKAP2-203ENST00000378037 KIR3DP1A8MWS1 328 aa7.29□□□□□ -1.24
CKAP2-203ENST00000378037 NKX2-8O15522 239 aa7.29□□□□□ -1.24
CKAP2-203ENST00000378037 MAP2K3P46734 347 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms