RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ADAM5Q6NVV9 412 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 ZNF704Q6ZNC4 412 aaPredicted RBP11.54□□□□□ -0.56
CKAP2-202ENST00000378034 SLC16A14Q7RTX9 510 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 MDP1Q86V88 176 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 IL17RDQ8NFM7 739 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 OR52E2Q8NGJ4 325 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 OR4Q3Q8NH05 313 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 NABP1Q96AH0 204 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 LURAP1Q96LR2 239 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 NMNAT3Q96T66 252 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 C1QTNF6Q9BXI9 259 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 TEX12Q9BXU0 123 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 NUAK2Q9H093 628 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 ZNF224Q9NZL3 707 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 OAZ3Q9UMX2 235 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 NBPF19A0A087WUL8 3843 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 RAB36O95755 333 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 HLA-HP01893 362 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 CD79AP11912 226 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 CTLA4P16410 223 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 MSR1P21757 451 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 LAP3P28838 519 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 GIPRP48546 466 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 ESRRGP62508 458 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 RAB1AP62820 205 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 TUBA1BP68363 451 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 TUBA4AP68366 448 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 SGCAQ16586 387 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 SLC35F1Q5T1Q4 408 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 KDM4DQ6B0I6 523 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 TMEM53Q6P2H8 277 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 TUBA1AQ71U36 451 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 GLB1L2Q8IW92 636 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 DEPDC4Q8N2C3 294 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 NPEPL1Q8NDH3 523 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 SH3GL3Q99963 347 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 RACGAP1Q9H0H5 632 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 PLEKHF2Q9H8W4 249 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 SEC61A2Q9H9S3 476 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 FKBP7Q9Y680 259 aa11.54□□□□□ -0.56
CKAP2-202ENST00000378034 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 PRR14LQ5THK1 2151 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 A0A1W2PPL8 197 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 ZNF503-AS2A6NEH8 195 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 ABCD4O14678 606 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 HMGN1P05114 100 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 CST2P09228 141 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 POU1F1P28069 291 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 CDAP32320 146 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 PTDSS1P48651 473 aaKnown RBP11.53□□□□□ -0.56
CKAP2-202ENST00000378034 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 CDK5Q00535 292 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 ZNF362Q5T0B9 420 aaPredicted RBP11.53□□□□□ -0.56
CKAP2-202ENST00000378034 SYT9Q86SS6 491 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 ZBTB46Q86UZ6 589 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 ICA1LQ8NDH6 482 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 SDR9C7Q8NEX9 313 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 DDOQ99489 341 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 RBM4BQ9BQ04 359 aaKnown RBP11.53□□□□□ -0.56
CKAP2-202ENST00000378034 RBM4Q9BWF3 364 aaKnown RBP11.53□□□□□ -0.56
CKAP2-202ENST00000378034 SLC25A19Q9HC21 320 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 POLE4Q9NR33 117 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 CMC2Q9NRP2 79 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
CKAP2-202ENST00000378034 A0A1W2PPR1 153 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 OR6C68A6NDL8 312 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 RIIAD1A6NNX1 92 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 ZNF3P17036 446 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 CRISP1P54107 249 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 PCBD1P61457 104 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 LSM6P62312 80 aaKnown RBP11.52□□□□□ -0.56
CKAP2-202ENST00000378034 PPP2R2BQ00005 443 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 PIGFQ07326 219 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 GINS1Q14691 196 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 ETFDHQ16134 617 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 KCNMB1Q16558 191 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 OR6V1Q8N148 313 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 PQLC1Q8N2U9 271 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 LRRC18Q8N456 261 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 ZNF75AQ96N20 296 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 KCNS3Q9BQ31 491 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 C1orf198Q9H425 327 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 RNF121Q9H920 327 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 CCNB1IP1Q9NPC3 277 aa11.52□□□□□ -0.56
CKAP2-202ENST00000378034 RPRD1BQ9NQG5 326 aaKnown RBP11.52□□□□□ -0.56
CKAP2-202ENST00000378034 COA3Q9Y2R0 106 aaPredicted RBP11.52□□□□□ -0.56
CKAP2-202ENST00000378034 APCP25054 2843 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 IGLV1-36A0A0B4J1U3 117 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 C12orf71A8MTZ7 269 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 PTHP01270 115 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 CRYAAP02489 173 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 CECR9P0C854 216 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.57
CKAP2-202ENST00000378034 SLC25A1P53007 311 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 GLO1Q04760 184 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 SLC37A3Q8NCC5 494 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 OR2T4Q8NH00 348 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms