RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 BPIFA2Q96DR5 249 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 TSPAN32Q96QS1 320 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 BCL2L14Q9BZR8 327 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 ZNF446Q9NWS9 450 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 GMPR2Q9P2T1 348 aaKnown RBP12.19□□□□□ -0.46
NELFE-201ENST00000375425 STX18Q9P2W9 335 aaKnown RBP12.19□□□□□ -0.46
NELFE-201ENST00000375425 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
NELFE-201ENST00000375425 GPR160Q9UJ42 338 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 ZNF346Q9UL40 294 aaKnown RBP12.19□□□□□ -0.46
NELFE-201ENST00000375425 HIF3AQ9Y2N7 669 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 SNX13Q9Y5W8 968 aa12.19□□□□□ -0.46
NELFE-201ENST00000375425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.18□□□□□ -0.464e-9■■■■□ 26.6
NELFE-201ENST00000375425 IGLV3-9A0A075B6K5 115 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 NPIPB13A6NJU9 1138 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 C17orf100A8MU93 164 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 NPIPB4C9JG80 1138 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 NCR1O76036 304 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 IFI30P13284 250 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 CCNOP22674 350 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 APLNRP35414 380 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 MAGEB1P43366 347 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 KLF3P57682 345 aaPredicted RBP12.18□□□□□ -0.46
NELFE-201ENST00000375425 SRSF2Q01130 221 aaKnown RBP12.18□□□□□ -0.46
NELFE-201ENST00000375425 HSF2Q03933 536 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 FMODQ06828 376 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 CD47Q08722 323 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 TOP3AQ13472 1001 aaPredicted RBP12.18□□□□□ -0.46
NELFE-201ENST00000375425 SGCAQ16586 387 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 KRTAP24-1Q3LI83 254 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 PABPC1L2AQ5JQF8 200 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 UGT2A3Q6UWM9 527 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 VTCN1Q7Z7D3 282 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 SLC15A3Q8IY34 581 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 ICA1LQ8NDH6 482 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 NABP1Q96AH0 204 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 NMD3Q96D46 503 aaKnown RBP12.18□□□□□ -0.46
NELFE-201ENST00000375425 PRRC1Q96M27 445 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 RBP7Q96R05 134 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 NARFLQ9H6Q4 476 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 SMURF2Q9HAU4 748 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 HINT3Q9NQE9 182 aaKnown RBP12.18□□□□□ -0.46
NELFE-201ENST00000375425 ZNF275Q9NSD4 429 aaPredicted RBP12.18□□□□□ -0.46
NELFE-201ENST00000375425 RHCGQ9UBD6 479 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 UGT2A1Q9Y4X1 527 aa12.18□□□□□ -0.46
NELFE-201ENST00000375425 HTR3EA5X5Y0 456 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 J3KTA2 159 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 SLC22A2O15244 555 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 ZNF32P17041 273 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 MAKP20794 623 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 STOMP27105 288 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 CTXN1P60606 82 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 RPL27P61353 136 aaKnown RBP12.17□□□□□ -0.46
NELFE-201ENST00000375425 CCL8P80075 99 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 MRPS11P82912 194 aaKnown RBP12.17□□□□□ -0.46
NELFE-201ENST00000375425 TAF11Q15544 211 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 THEM4Q5T1C6 240 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 TMEM154Q6P9G4 183 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 SLC25A47Q6Q0C1 308 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 IGFN1Q86VF2 1251 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 MEX3DQ86XN8 651 aaKnown RBP12.17□□□□□ -0.46
NELFE-201ENST00000375425 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 OR1J1Q8NGS3 322 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 OR51A7Q8NH64 312 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 CLDND2Q8NHS1 167 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 CCDC134Q9H6E4 229 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 MAN2C1Q9NTJ4 1040 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 AP3M1Q9Y2T2 418 aa12.17□□□□□ -0.46
NELFE-201ENST00000375425 TRAV27A0A087WT01 109 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 B4DSR2 109 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 FFAR1O14842 300 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 WNT9BO14905 357 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 PPIHO43447 177 aaKnown RBP12.16□□□□□ -0.46
NELFE-201ENST00000375425 SAGP10523 405 aaPredicted RBP12.16□□□□□ -0.46
NELFE-201ENST00000375425 LIPEQ05469 1076 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 ARPINQ7Z6K5 226 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 NRMQ8IXM6 262 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 AKR7LQ8NHP1 331 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 SNX33Q8WV41 574 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 POM121L2Q96KW2 1035 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 RACGAP1Q9H0H5 632 aa12.16□□□□□ -0.46
NELFE-201ENST00000375425 LOC100509620A0A075B734 347 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 CXCR6O00574 342 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 CDC14BO60729 498 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 RP2O75695 350 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 ZNF682O95780 498 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 IFNW1P05000 195 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 NR2C1P13056 603 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 COX4I1P13073 169 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 DRD4P21917 467 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
NELFE-201ENST00000375425 GUCA1AP43080 201 aaPredicted RBP12.15□□□□□ -0.46
NELFE-201ENST00000375425 SLC7A2P52569 658 aa12.15□□□□□ -0.46
NELFE-201ENST00000375425 DVL1P1P54792 670 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms