RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MDGA2Q7Z553 956 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 LRRC28Q86X40 367 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RAB43Q86YS6 212 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 GNRHR2Q96P88 292 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 DERL3Q96Q80 235 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 NOX4Q9NPH5 578 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 KLHL9Q9P2J3 617 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ING1Q9UK53 422 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TBC1D24Q9ULP9 559 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CFAP54Q96N23 3096 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 AHCTF1Q8WYP5 2266 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MED12Q93074 2177 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PIN1P1O15428 100 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TMCC2O75069 709 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 AQP8O94778 261 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 P04436 131 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 AZGP1P25311 298 aaKnown RBP16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SFTPDP35247 375 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CCR9P51686 369 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MEP1BQ16820 701 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 Q499Y3 187 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RNF128Q8TEB7 428 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PSMF1Q92530 271 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 C4orf45Q96LM5 186 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 FOXN4Q96NZ1 517 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ABHD6Q9BV23 337 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ELOVL3Q9HB03 270 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ABRACLQ9P1F3 81 aa16.08■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR2M5A3KFT3 312 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SULT2B1O00204 365 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PDCD5O14737 125 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RAD1O60671 282 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 LRP3O75074 770 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF254O75437 659 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SRMP19623 302 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SRD5A2P31213 254 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SLC25A35Q3KQZ1 300 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 THEM4Q5T1C6 240 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 B3GNTL1Q67FW5 361 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 NOXO1Q8NFA2 376 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR52N5Q8NH56 324 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR6X1Q8NH79 312 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 THRSPQ92748 146 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RBP7Q96R05 134 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 COMMD4Q9H0A8 199 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TIGARQ9NQ88 270 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CYSLTR2Q9NS75 346 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ETAA1Q9NY74 926 aa16.08■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZFHX2Q9C0A1 2572 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PHF3Q92576 2039 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IGKV1D-43A0A0B4J1Z2 117 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF814B7Z6K7 855 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IGHG1P01857 330 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 APOA1P02647 267 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OPN1LWP04000 364 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CSF3P09919 207 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PGA4P0DJD7 388 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PGA3P0DJD8 388 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 EPXP11678 715 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF823P16415 610 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ELK1P19419 428 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 NBL1P41271 181 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 H3F3AP84243 136 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SCN1BQ07699 218 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 EIF2B1Q14232 305 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TRIP6Q15654 476 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PYDC2Q56P42 97 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RAET1LQ5VY80 246 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 LRRN1Q6UXK5 716 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PRSS35Q8N3Z0 413 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ADAMTS17Q8TE56 1095 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SLC25A44Q96H78 314 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PIGQQ9BRB3 760 aa16.07■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A1W2PPK0 400 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A1W2PQ09 198 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ACOD1A6NK06 481 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 G3V3Y1 287 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 HLA-DQB1P01920 261 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ATF1P18846 271 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 NPR2P20594 1047 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 KIR3DL2P43630 455 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RAC1P63000 192 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ASAH1Q13510 395 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TMEM225Q6GV28 225 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GDPD3Q7L5L3 318 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 KRT77Q7Z794 578 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF554Q86TJ5 538 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF227Q86WZ6 799 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GLB1L2Q8IW92 636 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 BEST3Q8N1M1 668 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TRMT10AQ8TBZ6 339 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ST7LQ8TDW4 575 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 EMC6Q9BV81 110 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PARD6AQ9NPB6 346 aa16.06■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TRBV5-7A0A0A0MS05 114 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 LOC101059948A0A1B0GTJ6 334 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GPR171O14626 319 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms