RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 COL9A2Q14055 689 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF585AQ6P3V2 769 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 UBE3DQ7Z6J8 389 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 OR51D1Q8NGF3 324 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 OR52E2Q8NGJ4 325 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 OR13C8Q8NGS7 320 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 PHB2Q99623 299 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 RNF126Q9BV68 326 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SLC17A9Q9BYT1 436 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 DUSP15Q9H1R2 295 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 RGCCQ9H4X1 137 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 COL4A3Q01955 1670 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3KA0A087X1G2 549 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 OR52A4PA6NMU1 304 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 TSTD3H0UI37 97 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ALOX12BO75342 701 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ARG1P05089 322 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 CLDN2P57739 230 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SNRPNP63162 240 aaKnown RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 DUSP2Q05923 314 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 PPP1R1AQ13522 171 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ERV3-1Q14264 604 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 GAMTQ14353 236 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SURF2Q15527 256 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 C21orf62-AS1Q17RA5 79 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SCGB2B2Q4G0G5 96 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 C9orf64Q5T6V5 341 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ARHGAP11AQ6P4F7 1023 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF836Q6ZNA1 936 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 C11orf96Q7Z7L8 435 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 SLC25A42Q86VD7 318 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 RANBP3LQ86VV4 465 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ZSCAN4Q8NAM6 433 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 UBAC2Q8NBM4 344 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 OR10D4PQ8NGN7 298 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 PMM1Q92871 262 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
PRPF4-201ENST00000374198 GUCD1Q96NT3 240 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 IL17FQ96PD4 163 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 ZDHHC6Q9H6R6 413 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 VSIG4Q9Y279 399 aa11.72□□□□□ -0.53
PRPF4-201ENST00000374198 TRAV8-7A0A075B6U6 113 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3DA0A087WVF3 549 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3IA0A087WXS9 549 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 SYNDIG1LA6NDD5 238 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3FA6NER0 549 aaPredicted RBP11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3LB9A6J9 549 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 CLDN4O14493 209 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 NDUFS4O43181 175 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 IL2RAP01589 272 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 MAS1LP35410 378 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 NDUFA6P56556 154 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 AWAT2Q6E213 333 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3CQ6IPX1 549 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 RTN4RL1Q86UN2 441 aaPredicted RBP11.71□□□□□ -0.53
PRPF4-201ENST00000374198 PPP1R3BQ86XI6 285 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TBC1D3Q8IZP1 549 aaPredicted RBP11.71□□□□□ -0.53
PRPF4-201ENST00000374198 BPIFB2Q8N4F0 458 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 TRAM1L1Q8N609 369 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 CA5BP1Q8WTZ4 195 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 SEH1LQ96EE3 360 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 C20orf24Q9BUV8 137 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF350Q9GZX5 532 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 LMAN1LQ9HAT1 526 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 KCNE5Q9UJ90 142 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 ADAM29Q9UKF5 820 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 MYO9BQ13459 2157 aa11.71□□□□□ -0.53
PRPF4-201ENST00000374198 FEZF1A0PJY2 475 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 P2RX6O15547 441 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 LRP3O75074 770 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 LYPD3O95274 346 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 ITGA5P08648 1049 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 CTSAP10619 480 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 SULT1A1P50225 295 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 KCNAB1Q14722 419 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 DHCR24Q15392 516 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 RSU1Q15404 277 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 CLEC9AQ6UXN8 241 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 DPPA2Q7Z7J5 298 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 NUP43Q8NFH3 380 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 OR5T3Q8NGG3 340 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 OR4K13Q8NH42 304 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 GPBAR1Q8TDU6 330 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 TGM7Q96PF1 710 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 CST11Q9H112 138 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 OR2S2Q9NQN1 319 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 GDE1Q9NZC3 331 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 SLC23A2Q9UGH3 650 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 KCNG2Q9UJ96 466 aa11.71□□□□□ -0.54
PRPF4-201ENST00000374198 PTPRSQ13332 1948 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 SZT2Q5T011 3432 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 C5orf51A6NDU8 294 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 PRAMEF26H0Y7S4 382 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 H7C1Q1 480 aa11.7□□□□□ -0.54
PRPF4-201ENST00000374198 CTNNB1P35222 781 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms