RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 FOXJ2Q9P0K8 574 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 A0A0G2JMP0 313 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 A0A0X1KG70 313 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 PLA2G10O15496 165 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 HPP00738 406 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 SNRPBP14678 240 aaKnown RBP17.51■□□□□ 0.39
HDAC1-201ENST00000373548 EIF2B1Q14232 305 aaKnown RBP17.51■□□□□ 0.39
HDAC1-201ENST00000373548 WDR38Q5JTN6 314 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 MDGA2Q7Z553 956 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF454Q8N9F8 522 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 OR4M2Q8NGB6 313 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 OR10AC1Q8NH08 325 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 EDEM2Q9BV94 578 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 C11orf54Q9H0W9 315 aaPredicted RBP17.51■□□□□ 0.39
HDAC1-201ENST00000373548 ANKRD10Q9NXR5 420 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 ABRACLQ9P1F3 81 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 HDGFL3Q9Y3E1 203 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 TMEM212A6NML5 194 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 KHDRBS3O75525 346 aaKnown RBP17.51■□□□□ 0.39
HDAC1-201ENST00000373548 ICAM2P13598 275 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 SOX2P48431 317 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 UEVLDQ8IX04 471 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF676Q8N7Q3 588 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 DTX3Q8N9I9 347 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 RNF128Q8TEB7 428 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 COMMD4Q9H0A8 199 aa17.51■□□□□ 0.39
HDAC1-201ENST00000373548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDAC1-201ENST00000373548 A0A1B0GVC2 190 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 A6NIN4 97 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF254O75437 659 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 FKBP2P26885 142 aaKnown RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 RBMS1P29558 406 aaKnown RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 TALDO1P37837 337 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 RASGEF1BQ0VAM2 473 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 TRIQKQ629K1 86 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 B3GNTL1Q67FW5 361 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 KCTD18Q6PI47 426 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 KRT77Q7Z794 578 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 RDH10Q8IZV5 341 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 OR1J4Q8NGS1 313 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 MRPL13Q9BYD1 178 aaKnown RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 ANKRD61A6NGH8 418 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 PDCD5O14737 125 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 TRAF3IP2O43734 574 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 RAMP1O60894 148 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 MT-CO3P00414 261 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 PNPP00491 289 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 KLK2P20151 261 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 MAPK3P27361 379 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 DSCR4P56555 118 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 RPS15P62841 145 aaKnown RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF239Q16600 458 aaKnown RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 PCK2Q16822 640 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 TEX30Q5JUR7 227 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 TIGD3Q6B0B8 471 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 OR52N5Q8NH56 324 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 MIB2Q96AX9 1013 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 JSRP1Q96MG2 331 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-201ENST00000373548 KCNJ15Q99712 375 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 SLC22A4Q9H015 551 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 BRD7Q9NPI1 651 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 P4HTMQ9NXG6 502 aa17.5■□□□□ 0.39
HDAC1-201ENST00000373548 DOCK10Q96BY6 2186 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 TRABD2BA6NFA1 517 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 ZIC3O60481 467 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF432O94892 652 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF823P16415 610 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 ODF4Q2M2E3 257 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 OR7E24Q6IFN5 339 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 GPAT4Q86UL3 456 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 IL17RDQ8NFM7 739 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 OR51A4Q8NGJ6 313 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 SGCZQ96LD1 299 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 TMEM9BQ9NQ34 198 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 TEKT2Q9UIF3 430 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 LRP12Q9Y561 859 aa17.49■□□□□ 0.39
HDAC1-201ENST00000373548 CCDC187A0A096LP49 1063 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 TRBV5-7A0A0A0MS05 114 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 AQP7P3A6NL99 342 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 SULT2B1O00204 365 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 CCR9P51686 369 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 CARTPTQ16568 116 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 TMEM225Q6GV28 225 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 STAC2Q6ZMT1 411 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 TMPPEQ6ZT21 453 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF433Q8N7K0 673 aaPredicted RBP17.48■□□□□ 0.39
HDAC1-201ENST00000373548 C19orf18Q8NEA5 215 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 TMEM41AQ96HV5 264 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 OXGR1Q96P68 337 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 IFITM5A6NNB3 132 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 PITPNBP48739 271 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 RIDAP52758 137 aaKnown RBP17.48■□□□□ 0.39
HDAC1-201ENST00000373548 SLC35A1P78382 337 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 MFGE8Q08431 387 aaPredicted RBP17.48■□□□□ 0.39
HDAC1-201ENST00000373548 RAET1LQ5VY80 246 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 DHRS13Q6UX07 377 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 LINC00346Q8IVM7 164 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 GPR148Q8TDV2 347 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms