RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 G3V2L1 256 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 RAB29O14966 203 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 ATP1B1P05026 303 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 SMAD2Q15796 467 aaKnown RBP14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 ZNF429Q86V71 674 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 SLC23A1Q9UHI7 598 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 DUOX1Q9NRD9 1551 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 ASAH1Q13510 395 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 TBPL2Q6SJ96 375 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 KIRREL1Q96J84 757 aa14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 CCNL2Q96S94 520 aaPredicted RBP14.17□□□□□ -0.14
GTF3C4-201ENST00000372146 SELPP16109 830 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 FDXRP22570 491 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 TAS2R45P59539 299 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 SIRPAP78324 504 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 MFSD12Q6NUT3 480 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 WDR73Q6P4I2 378 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PRSS42Q7Z5A4 293 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PQLC3Q8N755 202 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 KIAA1217Q5T5P2 1943 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 S1PR4O95977 384 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 C9orf131Q5VYM1 1079 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 CHRDL1Q9BU40 450 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 EDEM2Q9BV94 578 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 MVB12BQ9H7P6 319 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 MSL2Q9HCI7 577 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 BTNL2Q9UIR0 455 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PI4KAP42356 2102 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PIRO00625 290 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 LEFTY1O75610 366 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 TGFBR1P36897 503 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 HSD17B7P56937 341 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 ZNF91Q05481 1191 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 SPANXN5Q5MJ07 72 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PRSS35Q8N3Z0 413 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 SLC22A24Q8N4F4 322 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 RHOFQ9HBH0 211 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 ACAA1P09110 424 aaPredicted RBP14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 VEZF1Q14119 521 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 ELOBQ15370 118 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 ZNF805Q5CZA5 627 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 MMP26Q9NRE1 261 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 GLCEO94923 617 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 MPC1LP0DKB6 136 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 CMTM8Q8IZV2 173 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 OR1J1Q8NGS3 322 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 FUBP1Q96AE4 644 aaKnown RBP14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 ZNF407Q9C0G0 2248 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PKIAP61925 76 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 KDM4DQ6B0I6 523 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 SMG9Q9H0W8 520 aaKnown RBP14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 KLK4Q9Y5K2 254 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 PMS2P1A4D2B8 440 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 SLC22A20A6NK97 555 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 KIF13BQ9NQT8 1826 aa14.16□□□□□ -0.14
GTF3C4-201ENST00000372146 AQP8O94778 261 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 T-ENOLP0DO92 83 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 FECHP22830 423 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 ZNF85Q03923 595 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 OXA1LQ15070 435 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 SYT9Q86SS6 491 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 ZNF485Q8NCK3 441 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 TAAR9Q96RI9 348 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 IGSF5Q9NSI5 407 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 RAB22AQ9UL26 194 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 ROBO1Q9Y6N7 1651 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 OR8G3PP0DMU2 310 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 GCSHP23434 173 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 PSMB6P28072 239 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 RAD52P43351 418 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 VGLL2Q8N8G2 317 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 ST6GALNAC4Q9H4F1 302 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 NAT8BQ9UHF3 227 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 RGPD8O14715 1765 aaPredicted RBP14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 hCG_1809904A0A1W2PP81 198 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 A0A1W2PR64 198 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 A0A1W2PRV1 198 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 GYPAP02724 150 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 FAM131CQ96AQ9 280 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 PLA2G12AQ9BZM1 189 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 BCL9O00512 1426 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 RRASP10301 218 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 IL1RNP18510 177 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 MIDNQ504T8 468 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 MBD3L1Q8WWY6 194 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 IL17FQ96PD4 163 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 RIMS4Q9H426 269 aaPredicted RBP14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 LMAN1LQ9HAT1 526 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 RGS11O94810 467 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 SUB1P53999 127 aaKnown RBP eCLIP14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 NR0B2Q15466 257 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 WBP2NLQ6ICG8 309 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 LHX4Q969G2 390 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 SORT1Q99523 831 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 PTDSS2Q9BVG9 487 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 PLSCR3Q9NRY6 295 aa14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 ING1Q9UK53 422 aaPredicted RBP14.15□□□□□ -0.14
GTF3C4-201ENST00000372146 PPP1R3CQ9UQK1 317 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms