RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SFTPA1Q8IWL2 248 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 ZNF454Q8N9F8 522 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CHST11Q9NPF2 352 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 GPATCH2Q9NW75 528 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CTSFQ9UBX1 484 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 LAMB1P07942 1786 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 STMND1H3BQB6 276 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 UBCP0CG48 685 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 GPX2P18283 190 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 KITLGP21583 273 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 APOBEC1P41238 236 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CLINT1Q14677 625 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 OR8G1Q15617 311 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 SDHAF2Q9NX18 166 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 DIMT1Q9UNQ2 313 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 PRAF2O60831 178 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 GLI4P10075 376 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SLC6A12P48065 614 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 MAP2K6P52564 334 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 MRPS34P82930 218 aaKnown RBP11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SLC10A1Q14973 349 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 GDPD3Q7L5L3 318 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 NRARPQ7Z6K4 114 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 FAM3DQ96BQ1 224 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 PLCXD1Q9NUJ7 323 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SLC25A37Q9NYZ2 338 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 DSCR3O14972 297 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 DEGS1O15121 323 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 GPRIN2O60269 458 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SRMP19623 302 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SNCAP37840 140 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 RAD52P43351 418 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 ETV1P50549 477 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 CATR1Q13166 79 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 MYBPHQ13203 477 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 CAMK2BQ13554 666 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 GPR55Q9Y2T6 319 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-207ENST00000368226 ARID1BQ8NFD5 2236 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-207ENST00000368226 FITM1A5D6W6 292 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 PPM1DO15297 605 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 PIAS2O75928 621 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 ZNF728P0DKX0 622 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 RAB4AP20338 218 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 CLDN15P56746 228 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 MSMO1Q15800 293 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 OR2B11Q5JQS5 317 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 RTL6Q6ICC9 239 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 GUSBP11Q6P575 273 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 DHRS13Q6UX07 377 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 OVCH1Q7RTY7 1134 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SPEM1Q8N4L4 309 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 GPR171O14626 319 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 RPL11P62913 178 aaKnown RBP11.79□□□□□ -0.52
PTPRK-207ENST00000368226 ACKR1Q16570 336 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 CMIPQ8IY22 773 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SEMA6DQ8NFY4 1073 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 OR13C5Q8NGS8 318 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 SLC22A11Q9NSA0 550 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
PTPRK-207ENST00000368226 FAM221AA4D161 298 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 P2RX6O15547 441 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 NID1P14543 1247 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 LIPAP38571 399 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 USP51Q70EK9 711 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 UBALD2Q8IYN6 164 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 CPNE4Q96A23 557 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-207ENST00000368226 ZNF486Q96H40 463 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-207ENST00000368226 SLC25A31Q9H0C2 315 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 SIRPB1O00241 398 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 SNRNP70P08621 437 aaKnown RBP11.78□□□□□ -0.52
PTPRK-207ENST00000368226 CDK4P11802 303 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 RAB5BP61020 215 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 CMPK2Q5EBM0 449 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 MYOTQ9UBF9 498 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 NHSL1Q5SYE7 1610 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 EIF4E2O60573 245 aaKnown RBP11.78□□□□□ -0.52
PTPRK-207ENST00000368226 DEFA4P12838 97 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 BSGP35613 385 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 RBMXL3Q8N7X1 1067 aaKnown RBP11.78□□□□□ -0.52
PTPRK-207ENST00000368226 SUMF2Q8NBJ7 301 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 OPA3Q9H6K4 179 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 ANKRD33BA6NCL7 494 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 UPK1AO00322 258 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 MSTNO14793 375 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 KLK10O43240 276 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 CHATP28329 748 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 B4GALNT1Q00973 533 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 ALKAL2Q6UX46 152 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 CYHR1Q6ZMK1 362 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 SIAH3Q8IW03 269 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 DEFB124Q8NES8 71 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 ISL2Q96A47 359 aa11.78□□□□□ -0.52
PTPRK-207ENST00000368226 ANKRD9Q96BM1 317 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-207ENST00000368226 LYSMD1Q96S90 227 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms