RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 IL17RDQ8NFM7 739 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 OR14L1PQ8NHC6 308 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 SCMH1Q96GD3 660 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 C5orf34Q96MH7 638 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 FUNDC2Q9BWH2 189 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 TP53TG5Q9Y2B4 290 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 LSM2Q9Y333 95 aaKnown RBP10.8□□□□□ -0.68
USF1-203ENST00000368021 PEX16Q9Y5Y5 336 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 LOC102725191A0A1B0GVB3 256 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 A0A1W2PNR3 127 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TUBAL3A6NHL2 446 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 C12orf71A8MTZ7 269 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SULT2B1O00204 365 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 MYL12BO14950 172 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 DNPH1O43598 174 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 AKR7A3O95154 331 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 HPNP05981 417 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 CLUP10909 449 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SPI1P17947 270 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 HTR2BP41595 481 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 DAP3P51398 398 aaKnown RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 P2RY4P51582 365 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SSTP61278 116 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 H3F3AP84243 136 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 C1DQ13901 141 aaKnown RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 PON3Q15166 354 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 STK11Q15831 433 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TIGD6Q17RP2 521 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 LINC00518Q8N0U6 118 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 POMGNT2Q8NAT1 580 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TMEM178AQ8NBL3 297 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 OR51G2Q8NGK0 314 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 OR9Q1Q8NGQ5 310 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 HES7Q9BYE0 225 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 C6orf62Q9GZU0 229 aaPredicted RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 SLC25A18Q9H1K4 315 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 INPP5EQ9NRR6 644 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TAS2R16Q9NYV7 291 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 PTTG3PQ9NZH4 202 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 MOKQ9UQ07 419 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 PRSS37A4D1T9 235 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 A6NIZ1 184 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 AQP7P3A6NL99 342 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TOR1AO14656 332 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 EIF1BO60739 113 aaKnown RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 GLSO94925 669 aaPredicted RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 TGM6O95932 706 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 RENP00797 406 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 GYPBP06028 91 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SBK2P0C263 348 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TNFSF10P50591 281 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SLC16A1P53985 500 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 GFRA1P56159 465 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 RAP1BP61224 184 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 RAP1AP62834 184 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 CSNK2A1P68400 391 aaPredicted RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 HSF1Q00613 529 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TNK1Q13470 666 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SPHARQ15513 63 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TAB1Q15750 504 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 ASB18Q6ZVZ8 466 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 GALNTL5Q7Z4T8 443 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 YRDCQ86U90 279 aaKnown RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 ACBD7Q8N6N7 88 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 ZFP62Q8NB50 900 aaPredicted RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 OR2T4Q8NH00 348 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 ZPLD1Q8TCW7 415 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 DYNC2LI1Q8TCX1 351 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 RPL3LQ92901 407 aaKnown RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 KLHL15Q96M94 604 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 SFXN2Q96NB2 322 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 MFRPQ9BY79 579 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TTTY12Q9BZ98 90 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.79□□□□□ -0.68
USF1-203ENST00000368021 ADGRL4Q9HBW9 690 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 ASB6Q9NWX5 421 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 GLTPQ9NZD2 209 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 VSX1Q9NZR4 365 aaPredicted RBP10.79□□□□□ -0.68
USF1-203ENST00000368021 B3GAT1Q9P2W7 334 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 CLEC2DQ9UHP7 191 aa10.79□□□□□ -0.68
USF1-203ENST00000368021 TNRC6AQ8NDV7 1962 aaKnown RBP10.78□□□□□ -0.68
USF1-203ENST00000368021 TFECO14948 347 aaPredicted RBP10.78□□□□□ -0.68
USF1-203ENST00000368021 TRAPPC6AO75865 159 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 GLCEO94923 617 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 APOL3O95236 402 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 PLGP00747 810 aaPredicted RBP10.78□□□□□ -0.68
USF1-203ENST00000368021 OPN1LWP04000 364 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 LIMS3P0CW19 117 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 LIMS4P0CW20 117 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 ATF4P18848 351 aaPredicted RBP10.78□□□□□ -0.68
USF1-203ENST00000368021 ACVR1BP36896 505 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 ACTC1P68032 377 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 ACTA1P68133 377 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 IFITM3Q01628 133 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 MED22Q15528 200 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 CTF1Q16619 201 aa10.78□□□□□ -0.68
USF1-203ENST00000368021 ZNF766Q5HY98 468 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms