RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 UPK3AO75631 287 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 OR2A4O95047 310 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 RAB38P57729 211 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 CXADRP78310 365 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 ARMC10Q8N2F6 343 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 BAHD1Q8TBE0 780 aaPredicted RBP12.11□□□□□ -0.47
NCDN-201ENST00000356090 TM4SF19Q96DZ7 209 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
NCDN-201ENST00000356090 OR2A7Q96R45 310 aa12.11□□□□□ -0.47
NCDN-201ENST00000356090 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
NCDN-201ENST00000356090 KCNJ13O60928 360 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 CA3P07451 260 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 NTSR1P30989 418 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 SDHAP31040 664 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 ETFDHQ16134 617 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 OR5M9Q8NGP3 310 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 SLC37A2Q8TED4 501 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 SHARPINQ9H0F6 387 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 ZCCHC4Q9H5U6 513 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 TAS2R4Q9NYW5 299 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 CABIN1Q9Y6J0 2220 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 FREM3P0C091 2139 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 SPAG17Q6Q759 2223 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 A0A0J9YY10 115 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 TMEM272A0A1B0GTI8 110 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 ARPC3O15145 178 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 SRPX2O60687 465 aaPredicted RBP12.1□□□□□ -0.47
NCDN-201ENST00000356090 SMIM10L1P0DMW3 83 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 VEGFBP49765 207 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
NCDN-201ENST00000356090 CAPZA1P52907 286 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 ACTBP60709 375 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 ACTG1P63261 375 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 OR7A5Q15622 319 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 DMRTC1Q5HYR2 192 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 Q6ZSR6 202 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 SMIM10Q96HG1 83 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 OR2S2Q9NQN1 319 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 BRWD1Q9NSI6 2320 aa12.1□□□□□ -0.47
NCDN-201ENST00000356090 TMEM212A6NML5 194 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 NAGAP17050 411 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 PRMT2P55345 433 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 EIF2B1Q14232 305 aaKnown RBP12.09□□□□□ -0.47
NCDN-201ENST00000356090 ZNF74Q16587 644 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 PARM1Q6UWI2 310 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 LRRTM1Q86UE6 522 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 INO80EQ8NBZ0 244 aaPredicted RBP12.09□□□□□ -0.47
NCDN-201ENST00000356090 OR6N1Q8NGY5 312 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 EFCAB7A8K855 629 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 H7C2Y5 167 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 ZNF749O43361 778 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 PLRG1O43660 514 aaKnown RBP12.09□□□□□ -0.47
NCDN-201ENST00000356090 FADS1O60427 444 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 AVPR2P30518 371 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 PRKXP51817 358 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 GGTLC2Q14390 218 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 ALG11Q2TAA5 492 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 NKAIN2Q5VXU1 208 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 GLT8D1Q68CQ7 371 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 WBP2NLQ6ICG8 309 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 ANKRD16Q6P6B7 361 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 OR52H1Q8NGJ2 320 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 THAP6Q8TBB0 222 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 PAQR8Q8TEZ7 354 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 CMBLQ96DG6 245 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 KLHDC3Q9BQ90 382 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 MRI1Q9BV20 369 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 SLC6A15Q9H2J7 730 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
NCDN-201ENST00000356090 TUBAL3A6NHL2 446 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 C17orf105B2RV13 164 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 LDOC1O95751 146 aaPredicted RBP12.09□□□□□ -0.47
NCDN-201ENST00000356090 IFNA6P05013 189 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 COL9A1P20849 921 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 HHEXQ03014 270 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 MESTQ5EB52 335 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 HAGHLQ6PII5 290 aaPredicted RBP12.09□□□□□ -0.47
NCDN-201ENST00000356090 LINC00346Q8IVM7 164 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 OR51A2Q8NGJ7 313 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 FGF14Q92915 247 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 CMTM3Q96MX0 182 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 ZNF426Q9BUY5 554 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 TREM1Q9NP99 234 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 HPF1Q9NWY4 346 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 TMEM14AQ9Y6G1 99 aa12.09□□□□□ -0.47
NCDN-201ENST00000356090 LOC100289279A0A1B0GTE1 492 aa12.08□□□□□ -0.48
NCDN-201ENST00000356090 SOX1O00570 391 aaPredicted RBP12.08□□□□□ -0.48
NCDN-201ENST00000356090 GLULP15104 373 aa12.08□□□□□ -0.48
NCDN-201ENST00000356090 EPHA4P54764 986 aa12.08□□□□□ -0.48
NCDN-201ENST00000356090 TAS2R19P59542 299 aa12.08□□□□□ -0.48
NCDN-201ENST00000356090 UBE2IP63279 158 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms