RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CYB561A3Q8NBI2 242 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 LINC01560Q8TB33 94 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 NANOS1Q8WY41 292 aaKnown RBP13.62□□□□□ -0.23
TRIM13-201ENST00000356017 TSSK2Q96PF2 358 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 NELFAQ9H3P2 528 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 SEC61A2Q9H9S3 476 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 NGBQ9NPG2 151 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 UGT2A1Q9Y4X1 527 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 ARPC4-TTLL3A0A0A6YYG9 625 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 A0A1W2PPL8 197 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 PRR23D1E9PI22 279 aaPredicted RBP13.61□□□□□ -0.23
TRIM13-201ENST00000356017 SEC14L2O76054 403 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 SNAP29O95721 258 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 PRR23D2P0DMB1 279 aaPredicted RBP13.61□□□□□ -0.23
TRIM13-201ENST00000356017 EPXP11678 715 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 CENPAP49450 140 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 BLVRAP53004 296 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 SNTB1Q13884 538 aaKnown RBP13.61□□□□□ -0.23
TRIM13-201ENST00000356017 PPA1Q15181 289 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 TAB1Q15750 504 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 ETFDHQ16134 617 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 FAM27BQ5VT28 67 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 FOXL2NBQ6ZUU3 175 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 ZNF555Q8NEP9 628 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 NMNAT2Q9BZQ4 307 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 KCNN2Q9H2S1 579 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 COA3Q9Y2R0 106 aaPredicted RBP13.61□□□□□ -0.23
TRIM13-201ENST00000356017 HCFC1P51610 2035 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 CACNA1CQ13936 2221 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 SPTBN1Q01082 2364 aaKnown RBP13.61□□□□□ -0.23
TRIM13-201ENST00000356017 IGLV1-36A0A0B4J1U3 117 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 DCTN6O00399 190 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 COX6B1P14854 86 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 MSR1P21757 451 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 CDAP32320 146 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 SGCAQ16586 387 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 PROKR2Q8NFJ6 384 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 OR52N5Q8NH56 324 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 TRUB1Q8WWH5 349 aaKnown RBP13.61□□□□□ -0.23
TRIM13-201ENST00000356017 OTULINQ96BN8 352 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 MBOAT4Q96T53 435 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 CRIM1Q9NZV1 1036 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 KCNN3Q9UGI6 736 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 MOKQ9UQ07 419 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 SLC25A15Q9Y619 301 aa13.61□□□□□ -0.23
TRIM13-201ENST00000356017 GCN1Q92616 2671 aaKnown RBP13.6□□□□□ -0.23
TRIM13-201ENST00000356017 H0YJX3 145 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 UBL3O95164 117 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 GGT2P36268 569 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 CAPZA2P47755 286 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 EFNB1P98172 346 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 SLC36A2Q495M3 483 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 PLBD1Q6P4A8 553 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 SLC16A14Q7RTX9 510 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 WDR31Q8NA23 367 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 OR8J1Q8NGP2 316 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 OR9Q1Q8NGQ5 310 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 PTP4A1Q93096 173 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 NABP1Q96AH0 204 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 ZC3HAV1LQ96H79 300 aaKnown RBP13.6□□□□□ -0.23
TRIM13-201ENST00000356017 WACQ9BTA9 647 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 POLE4Q9NR33 117 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 FAM118AQ9NWS6 357 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 IMPAD1Q9NX62 359 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 NDRG4Q9ULP0 352 aaKnown RBP13.6□□□□□ -0.23
TRIM13-201ENST00000356017 GMPPBQ9Y5P6 360 aa13.6□□□□□ -0.23
TRIM13-201ENST00000356017 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 LOC100130705A0A1B0GUX0 176 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 FAM183AA6NL82 134 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 E9PQ18 207 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 SLC16A6O15403 523 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 PRODHO43272 600 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 TLX2O43763 284 aaPredicted RBP13.59□□□□□ -0.23
TRIM13-201ENST00000356017 PRKYO43930 277 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 HLA-DQA2P01906 255 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 SPI1P17947 270 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 PTDSS1P48651 473 aaKnown RBP13.59□□□□□ -0.23
TRIM13-201ENST00000356017 PCBD1P61457 104 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 LSM6P62312 80 aaKnown RBP13.59□□□□□ -0.23
TRIM13-201ENST00000356017 HSF2Q03933 536 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 KEAP1Q14145 624 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 KCNMB1Q16558 191 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 TTC23Q5W5X9 447 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 FBXW10Q5XX13 1052 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 C22orf34Q6ZV56 151 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
TRIM13-201ENST00000356017 CPOQ8IVL8 374 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 SKA3Q8IX90 412 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 DEPDC4Q8N2C3 294 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 FAM169BQ8N8A8 192 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 TCEANCQ8N8B7 351 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 TMEM163Q8TC26 289 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 PITX2Q99697 317 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 SH3GL3Q99963 347 aa13.59□□□□□ -0.23
TRIM13-201ENST00000356017 HINT3Q9NQE9 182 aaKnown RBP13.59□□□□□ -0.23
TRIM13-201ENST00000356017 H2AFY2Q9P0M6 372 aaPredicted RBP13.59□□□□□ -0.23
TRIM13-201ENST00000356017 COL12A1Q99715 3063 aa13.58□□□□□ -0.24
TRIM13-201ENST00000356017 A0A1W2PR80 420 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms