RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 P2RY6Q15077 328 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 TAB1Q15750 504 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 MESTQ5EB52 335 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 AAED1Q7RTV5 226 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 WDFY1Q8IWB7 410 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ZNF786Q8N393 782 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 SLC37A3Q8NCC5 494 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 NMNAT3Q96T66 252 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 HDHD5Q9BXW7 423 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 PARPBPQ9NWS1 579 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ASB6Q9NWX5 421 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 KLHL21Q9UJP4 597 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 MED13LQ71F56 2210 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ARID1AO14497 2285 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 A0A1W2PR80 420 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 IDH3BO43837 385 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 VAMP5O95183 116 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 IGHMP01871 453 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 NUDT6P53370 316 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 RUNX1T1Q06455 604 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 CDK5R2Q13319 367 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 CAMK2DQ13557 499 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 PPA1Q15181 289 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 SMN1Q16637 294 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 NIPAL3Q6P499 406 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 CXXC5Q7LFL8 322 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 CPOQ8IVL8 374 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 ARIH2OSQ8N7S6 290 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 BBS1Q8NFJ9 593 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 OR9Q1Q8NGQ5 310 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 OR52N5Q8NH56 324 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 RHOXF1Q8NHV9 184 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 ZNF519Q8TB69 540 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 APH1BQ8WW43 257 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 LRR1Q96L50 414 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 OR10A4Q9H209 315 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 SLCO5A1Q9H2Y9 848 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 RERGLQ9H628 205 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 HINT3Q9NQE9 182 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 HSPE1-MOB4S4R3N1 261 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 MPZL2O60487 215 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 ENTPD6O75354 484 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 WBP4O75554 376 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 TXNDC12O95881 172 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 RENP00797 406 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 GYPBP06028 91 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 GABRB1P18505 474 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 COX5AP20674 150 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 PAICSP22234 425 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 HOXC12P31275 282 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 NTF4P34130 210 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 NR1H2P55055 460 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 FOXG1P55316 489 aaPredicted RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 ARMC4Q5T2S8 1044 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 CREB3L2Q70SY1 520 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 ZNF433Q8N7K0 673 aaPredicted RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 SYT14Q8NB59 555 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 BPIFB6Q8NFQ5 453 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 HSD17B8Q92506 261 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 HDAC2Q92769 488 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 NINJ1Q92982 152 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 HCAR1Q9BXC0 346 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 OR51V1Q9H2C8 321 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
TPM4-202ENST00000344824 MALT1Q9UDY8 824 aa12.11□□□□□ -0.47
TPM4-202ENST00000344824 OR6C68A6NDL8 312 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 A6NIZ1 184 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 ZNF726A6NNF4 738 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 FAM20BO75063 409 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 TRMUO75648 421 aaKnown RBP12.1□□□□□ -0.47
TPM4-202ENST00000344824 ATE1O95260 518 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
TPM4-202ENST00000344824 PLAUP00749 431 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 ITGA5P08648 1049 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 CLUP10909 449 aa12.1□□□□□ -0.47
TPM4-202ENST00000344824 SELENOPP49908 381 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms