RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLC19A1P41440 591 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 OR1D4P47884 311 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 CST6Q15828 149 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 GDF7Q7Z4P5 450 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 GABRG1Q8N1C3 465 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 CBARPQ8N350 705 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-201ENST00000334504 MFSD4AQ8N468 514 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 ARFGAP1Q8N6T3 406 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 GNPNAT1Q96EK6 184 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-201ENST00000334504 PCYT2Q99447 389 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 SOX7Q9BT81 388 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 CTDSP1Q9GZU7 261 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 BCO1Q9HAY6 547 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 CYB5R1Q9UHQ9 305 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 BCL2L11O43521 198 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 PMCHP20382 165 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 WNT7BP56706 349 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 TEKQ02763 1124 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 ETFDHQ16134 617 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 NKAIN3Q8N8D7 197 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 OR4D10Q8NGI6 311 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 CA5BP1Q8WTZ4 195 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 ARSGQ96EG1 525 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 POM121Q96HA1 1249 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 BANF2Q9H503 90 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 UCK1Q9HA47 277 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 NDUFB11Q9NX14 153 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 A0A0J9YY10 115 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 A0A1B0GTW7 788 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 ZC3H12DA2A288 527 aaKnown RBP9.04□□□□□ -0.96
COL4A6-201ENST00000334504 CNMDO75829 334 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 RGS11O94810 467 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 SPP1P10451 314 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 ADRA2CP18825 462 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 ALOX5APP20292 161 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 PCBP4P57723 403 aaKnown RBP9.04□□□□□ -0.96
COL4A6-201ENST00000334504 SHISA6Q6ZSJ9 500 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 HSD11B1LQ7Z5J1 315 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 OR52E1Q8NGJ3 308 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 TECTBQ96PL2 329 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 UBQLN4Q9NRR5 601 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
COL4A6-201ENST00000334504 SHPRHQ149N8 1683 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ADAMTS4O75173 837 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 AIFM1O95831 613 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF133P52736 654 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PCK2Q16822 640 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 GGNBP1Q5YKI7 109 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 MAMDC4Q6UXC1 1216 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ANGPTL5Q86XS5 388 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 BAP18Q8IXM2 172 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PELI3Q8N2H9 469 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 C11orf42Q8N5U0 333 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 OR52B4Q8NGK2 314 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PHYHIPQ92561 330 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PAAF1Q9BRP4 392 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 NXF2Q9GZY0 626 aaKnown RBP9.03□□□□□ -0.96
COL4A6-201ENST00000334504 RAB7AP51149 207 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 CLDN17P56750 224 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 THNSL2Q86YJ6 484 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PLXDC1Q8IUK5 500 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF296Q8WUU4 475 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-201ENST00000334504 NEURL2Q9BR09 285 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 GABRQQ9UN88 632 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 SSUH2Q9Y2M2 353 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 MYH7P12883 1935 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 TRAV34A0A0B4J273 112 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 RNASEK-C17orf49H0YIS7 233 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 AQP8O94778 261 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 C1orf105O95561 183 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 C5AR1P21730 350 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 HIST1H1TP22492 207 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-201ENST00000334504 AOAHP28039 575 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 CLLU1Q5K131 121 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 SLC16A14Q7RTX9 510 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 NAXDQ8IW45 347 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF566Q969W8 418 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 RASD2Q96D21 266 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 CMBLQ96DG6 245 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 SLC17A9Q9BYT1 436 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 GPR62Q9BZJ7 368 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 A4GALTQ9NPC4 353 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PADI1Q9ULC6 663 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PLSCR5A0PG75 271 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PRAMEF4O60810 478 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PIPP12273 146 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF718Q3SXZ3 478 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 FAM162BQ5T6X4 162 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PAQR6Q6TCH4 344 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ARRDC2Q8TBH0 407 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 PRR14Q9BWN1 585 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 CHST8Q9H2A9 424 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 LTN1O94822 1766 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 GJB3O75712 270 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 CD1EP15812 388 aa9.03□□□□□ -0.96
COL4A6-201ENST00000334504 RPL29P47914 159 aaKnown RBP9.03□□□□□ -0.96
COL4A6-201ENST00000334504 ERV3-1Q14264 604 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms