RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 RNF4P78317 190 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 MZT1Q08AG7 82 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 MEF2DQ14814 521 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 PHLDA2Q53GA4 152 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 HEPHL1Q6MZM0 1159 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 FAM199XQ6PEV8 388 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 PTRH1Q86Y79 214 aaKnown RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 SVBPQ8N300 66 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 MBOAT4Q96T53 435 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 HRH4Q9H3N8 390 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZNF355PQ9NSJ1 428 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ASB4Q9Y574 426 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SLC22A7Q9Y694 548 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 STK17BO94768 372 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TP53P04637 393 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 HSF1Q00613 529 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TMEM215Q68D42 235 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 KDM4DQ6B0I6 523 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 Q6ZTK2 550 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SYT13Q7L8C5 426 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 NLRP8Q86W28 1048 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TMEM99Q8N816 258 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 OR13C5Q8NGS8 318 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 NRTNQ99748 197 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 GON7Q9BXV9 100 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ING1Q9UK53 422 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SERPINA7P05543 415 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 SRMP19623 302 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GDNFP39905 211 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 NRARPQ7Z6K4 114 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 ADAMTS14Q8WXS8 1223 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 SAMD10Q9BYL1 202 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 KCNJ16Q9NPI9 418 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GNG12Q9UBI6 72 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 ZNF831Q5JPB2 1677 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GLB1P16278 677 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GNB3P16520 340 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 APEX1P27695 318 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 BSGP35613 385 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 ZNF93P35789 620 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 LIPAP38571 399 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 TAS2R31P59538 309 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 YOD1Q5VVQ6 348 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 SUMF1Q8NBK3 374 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 FAM71CQ8NEG0 241 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 OR51D1Q8NGF3 324 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 PSD2Q9BQI7 771 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 CHRNA9Q9UGM1 479 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 FBXL2Q9UKC9 423 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 A0A087WUU8 490 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 ARRB2P32121 409 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 TGFBR1P36897 503 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 HSD17B7P56937 341 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 CTU2Q2VPK5 515 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 OR4N2Q8NGD1 307 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 NID1P14543 1247 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 FPR3P25089 353 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 FOXC1Q12948 553 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 HLA-BQ31612 363 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 C11orf91Q3C1V1 193 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 BORAQ6PGQ7 559 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GRINAQ7Z429 371 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 SAT2Q96F10 170 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 METTL17Q9H7H0 456 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 BHLHE40O14503 412 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GLCEO94923 617 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 RD3LP0DJH9 198 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 MRPL19P49406 292 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 RPL23AP62750 156 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 CYCSP99999 105 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 ALKAL2Q6UX46 152 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 TPRA1Q86W33 373 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 LYSMD1Q96S90 227 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 OCSTAMPQ9BR26 566 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 WBP1LQ9NX94 342 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 TAS2R4Q9NYW5 299 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 BOLA1Q9Y3E2 137 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 CHST2Q9Y4C5 530 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GLSO94925 669 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 TFAP2AP05549 437 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 CELA2BP08218 269 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 TBC1D28Q2M2D7 210 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 SHEQ5VZ18 495 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GUSBP11Q6P575 273 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 PGAP1Q75T13 922 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 CPEB2Q7Z5Q1 589 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 ZNF546Q86UE3 836 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 LRRC56Q8IYG6 542 aaPredicted RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 ANKRD53Q8N9V6 530 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 EMG1Q92979 244 aaKnown RBP9.31□□□□□ -0.92
CHD3-201ENST00000330494 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 MED17Q9NVC6 651 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 MED29Q9NX70 200 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 GLTPQ9NZD2 209 aa9.31□□□□□ -0.92
CHD3-201ENST00000330494 C19orf53Q9UNZ5 99 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms