RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MEPEQ9NQ76 525 aaPredicted RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 OTOFQ9HC10 1997 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 IMPA2O14732 288 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 CSF1P09603 554 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 TPT1P13693 172 aaKnown RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 FGF9P31371 208 aaPredicted RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 RAB38P57729 211 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 CLRN1P58418 232 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 NXF5Q9H1B4 397 aaKnown RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 GGT3PA6NGU5 568 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 C4orf51C9J302 202 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 KCNJ13O60928 360 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 POU4F2Q12837 409 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 STEAP1BQ6NZ63 245 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 OR2AK2Q8NG84 335 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 C8orf44Q96CB5 159 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 SERINC1Q9NRX5 453 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 GPR160Q9UJ42 338 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 ZNF223Q9UK11 482 aaPredicted RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 FBXO4Q9UKT5 387 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 MEMO1Q9Y316 297 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 GALR3O60755 368 aaPredicted RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 MPIG6BO95866 241 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 CPT2P23786 658 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 EBPQ15125 230 aaKnown RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 C14orf28Q4W4Y0 310 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 HACD4Q5VWC8 232 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 LAMTOR1Q6IAA8 161 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 TMEM71Q6P5X7 295 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 TMEM52Q8NDY8 209 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 GPR148Q8TDV2 347 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 SLC25A19Q9HC21 320 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 FGF21Q9NSA1 209 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 NEUROG3Q9Y4Z2 214 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 OR5K3A6NET4 321 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 TMEM200CA6NKL6 621 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 SPINT1O43278 529 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 EPXP11678 715 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 CD1CP29017 333 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 POU3F4P49335 361 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 HTRA4P83105 476 aaPredicted RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 CAMK2DQ13557 499 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 ZNF674Q2M3X9 581 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 TSEN54Q7Z6J9 526 aaKnown RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 SHISA5Q8N114 240 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 YIPF5Q969M3 257 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 BMFQ96LC9 184 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 KLHL15Q96M94 604 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 FGF20Q9NP95 211 aaPredicted RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 NCDNQ9UBB6 729 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 ZNF629Q9UEG4 869 aaPredicted RBP13.92□□□□□ -0.18
VARS2-201ENST00000321897 ZNF281Q9Y2X9 895 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 ZNF337Q9Y3M9 751 aa13.92□□□□□ -0.18
VARS2-201ENST00000321897 FAM221BA6H8Z2 402 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 FAM74A7A6NL05 159 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 SHISA8B8ZZ34 492 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 F12P00748 615 aaPredicted RBP13.91□□□□□ -0.18
VARS2-201ENST00000321897 IFNA21P01568 189 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 RBMXP38159 391 aaKnown RBP13.91□□□□□ -0.18
VARS2-201ENST00000321897 CAMLGP49069 296 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 PRPS1P60891 318 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 SNTB1Q13884 538 aaKnown RBP13.91□□□□□ -0.18
VARS2-201ENST00000321897 FAM74A3Q4VXF1 159 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 BPIFCQ8NFQ6 507 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 LPAR4Q99677 370 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 BCL2L10Q9HD36 194 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 PUS1Q9Y606 427 aaKnown RBP eCLIP13.91□□□□□ -0.18
VARS2-201ENST00000321897 URGCP-MRPS24S4R325 110 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 GABARAPH6UMI1 98 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 LILRB5O75023 590 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 UTS2O95399 124 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 MPC2O95563 127 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 CTSBP07858 339 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 ANKRD34CP0C6C1 535 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 SLC35E2P0CK97 266 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 CD80P33681 288 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 CBLN3Q6UW01 205 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 TMEM200AQ86VY9 491 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 OR14K1Q8NGZ2 314 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 SULT4A1Q9BR01 284 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 RBM24Q9BX46 236 aaKnown RBP13.91□□□□□ -0.18
VARS2-201ENST00000321897 POFUT1Q9H488 388 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 KIF25Q9UIL4 384 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 SLC22A13Q9Y226 551 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 SLC17A4Q9Y2C5 497 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 CACNA1HO95180 2353 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 CD3DP04234 171 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 PTBP1P26599 531 aaKnown RBP eCLIP13.91□□□□□ -0.181e-7■■■■■ 29.2
VARS2-201ENST00000321897 CSF2RBP32927 897 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 TAS2R20P59543 309 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 EXOSC6Q5RKV6 272 aaKnown RBP13.91□□□□□ -0.18
VARS2-201ENST00000321897 ARTNQ5T4W7 220 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 C3orf33Q6P1S2 294 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 TTC9Q92623 222 aa13.91□□□□□ -0.18
VARS2-201ENST00000321897 USB1Q9BQ65 265 aaKnown RBP13.91□□□□□ -0.18
VARS2-201ENST00000321897 HMGA2P52926 109 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 ARHGAP11BQ3KRB8 267 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 C9orf135Q5VTT2 229 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms