RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 ALKBH2Q6NS38 261 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 PLBD1Q6P4A8 553 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 TCEANCQ8N8B7 351 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 NPEPL1Q8NDH3 523 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 BBS1Q8NFJ9 593 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 ITLN2Q8WWU7 325 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-201ENST00000311487 ADAD1Q96M93 576 aaKnown RBP16.01■□□□□ 0.15
HMGA1-201ENST00000311487 ULBP2Q9BZM5 246 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 CCDC90BQ9GZT6 254 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 NAA50Q9GZZ1 169 aaKnown RBP16.01■□□□□ 0.15
HMGA1-201ENST00000311487 ENOPH1Q9UHY7 261 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 RCE1Q9Y256 329 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 PCDHGB1Q9Y5G3 927 aa16.01■□□□□ 0.15
HMGA1-201ENST00000311487 NCOA6Q14686 2063 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-201ENST00000311487 SPTAN1Q13813 2472 aaKnown RBP16■□□□□ 0.15
HMGA1-201ENST00000311487 A0A096LPE4 126 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 A0A1W2PPZ6 126 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 A0A1W2PR80 420 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 SH3D21A4FU49 640 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 CRHP06850 196 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 CTLA4P16410 223 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 CEACAM16Q2WEN9 425 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 GPR139Q6DWJ6 353 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 LYPD4Q6UWN0 246 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 CXorf67Q86X51 503 aaPredicted RBP16■□□□□ 0.15
HMGA1-201ENST00000311487 ERI1Q8IV48 349 aaKnown RBP16■□□□□ 0.15
HMGA1-201ENST00000311487 ASB6Q9NWX5 421 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 ZNF226Q9NYT6 803 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 GCN1Q92616 2671 aaKnown RBP16■□□□□ 0.15
HMGA1-201ENST00000311487 RIIAD1A6NNX1 92 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 A8MXE2 369 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 AKAP8O43823 692 aaKnown RBP16■□□□□ 0.15
HMGA1-201ENST00000311487 TXNDC12O95881 172 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 PYCR1P32322 319 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 ITGADQ13349 1161 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 SLX4IPQ5VYV7 408 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 CPOQ8IVL8 374 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 OR6V1Q8N148 313 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 ZNF540Q8NDQ6 660 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 RHOXF1Q8NHV9 184 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 TMEM54Q969K7 222 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 PLEKHA8Q96JA3 519 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 OR51V1Q9H2C8 321 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 SLC25A19Q9HC21 320 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 GPR35Q9HC97 309 aa16■□□□□ 0.15
HMGA1-201ENST00000311487 A6NIZ1 184 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 H3BMQ9 156 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 RAD51DO75771 328 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 MPZL1O95297 269 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 GABRB1P18505 474 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 IGHV1-2P23083 117 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 RAP1BP61224 184 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 RAP1AP62834 184 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 EMX1Q04741 257 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-201ENST00000311487 PRR14LQ5THK1 2151 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 DEPDC4Q8N2C3 294 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 PTP4A1Q93096 173 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 COG8Q96MW5 612 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 SEC61A2Q9H9S3 476 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 CMC2Q9NRP2 79 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 LRRK2Q5S007 2527 aa15.99■□□□□ 0.15
HMGA1-201ENST00000311487 MT-ND2P03891 347 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 ITGA5P08648 1049 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 CD8BP10966 210 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 APEHP13798 732 aaKnown RBP15.98■□□□□ 0.15
HMGA1-201ENST00000311487 ZNF3P17036 446 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 GRK5P34947 590 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 GP2P55259 537 aaKnown RBP15.98■□□□□ 0.15
HMGA1-201ENST00000311487 HIST3H3Q16695 136 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 C12orf73Q69YU5 71 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 LILRB4Q8NHJ6 448 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 IPCEF1Q8WWN9 437 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-201ENST00000311487 SIGLEC11Q96RL6 698 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 CCNB1IP1Q9NPC3 277 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 HINT3Q9NQE9 182 aaKnown RBP15.98■□□□□ 0.15
HMGA1-201ENST00000311487 GALNT8Q9NY28 637 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 COA3Q9Y2R0 106 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-201ENST00000311487 A0A1W2PPL8 197 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 NPIPB13A6NJU9 1138 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 NPIPB4C9JG80 1138 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 ZNF587BE7ETH6 402 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 RGS10O43665 173 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 IDH3BO43837 385 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 MRPS14O60783 128 aaKnown RBP15.98■□□□□ 0.15
HMGA1-201ENST00000311487 INMTO95050 263 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 ATE1O95260 518 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 RENP00797 406 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 B4GALT1P15291 398 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 PCYT1AP49585 367 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 CSNK2BP67870 215 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 TEKQ02763 1124 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 MEP1BQ16820 701 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 KLHL12Q53G59 568 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 Q6ZT83 130 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 GABRG1Q8N1C3 465 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 POMGNT2Q8NAT1 580 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 SLC38A2Q96QD8 506 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 RBP7Q96R05 134 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 DDOQ99489 341 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms