RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SH3GL3Q99963 347 aa17.26■□□□□ 0.35
VEGFB-201ENST00000309422 TEX12Q9BXU0 123 aa17.26■□□□□ 0.35
VEGFB-201ENST00000309422 SYT4Q9H2B2 425 aa17.26■□□□□ 0.35
VEGFB-201ENST00000309422 BAIAP2Q9UQB8 552 aa17.26■□□□□ 0.35
VEGFB-201ENST00000309422 SLC22A23A1A5C7 686 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 C12orf71A8MTZ7 269 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 H3BN98 237 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 IFNGP01579 166 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 MSR1P21757 451 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 RPS23P62266 143 aaKnown RBP17.25■□□□□ 0.35
VEGFB-201ENST00000309422 COX10Q12887 443 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 PPP1R8Q12972 351 aaKnown RBP17.25■□□□□ 0.35
VEGFB-201ENST00000309422 TBC1D28Q2M2D7 210 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 LEG1Q6P5S2 330 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 SLC25A47Q6Q0C1 308 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 RASSF6Q6ZTQ3 369 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 ALDH16A1Q8IZ83 802 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 MUC15Q8N387 334 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 CLDN22Q8N7P3 220 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 GPA33Q99795 319 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 DGCR6LQ9BY27 220 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 CDH20Q9HBT6 801 aa17.25■□□□□ 0.35
VEGFB-201ENST00000309422 PDP1Q9P0J1 537 aaPredicted RBP17.25■□□□□ 0.35
VEGFB-201ENST00000309422 ARPC3O15145 178 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 TXNDC12O95881 172 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 APLNRP35414 380 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 SNRPD2P62316 118 aaKnown RBP17.24■□□□□ 0.35
VEGFB-201ENST00000309422 UNQ6126/PRO20091Q6UXV3 157 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 LRRC75A-AS1Q8N1F1 130 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 ATG16L2Q8NAA4 619 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 OR2T33Q8NG76 320 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 NEUROG1Q92886 237 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 RAB3IPQ96QF0 476 aaPredicted RBP17.24■□□□□ 0.35
VEGFB-201ENST00000309422 WACQ9BTA9 647 aa17.24■□□□□ 0.35
VEGFB-201ENST00000309422 FBXO9Q9UK97 447 aaPredicted RBP17.24■□□□□ 0.35
VEGFB-201ENST00000309422 NAV2Q8IVL1 2488 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 ANKRD17O75179 2603 aaKnown RBP17.23■□□□□ 0.35
VEGFB-201ENST00000309422 SLC16A7O60669 478 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 GASTP01350 101 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 FASP25445 335 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 APOBEC3AP31941 199 aaPredicted RBP17.23■□□□□ 0.35
VEGFB-201ENST00000309422 CDAP32320 146 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 TTKP33981 857 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 SCRN3Q0VDG4 424 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 DAG1Q14118 895 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 VHLLQ6RSH7 139 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 GLB1L2Q8IW92 636 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 SLC30A7Q8NEW0 376 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 DNAJC9Q8WXX5 260 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 PERPQ96FX8 193 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 SNX18Q96RF0 628 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 BDH2Q9BUT1 245 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 EGLN3Q9H6Z9 239 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 CA10Q9NS85 328 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 CBLN4Q9NTU7 201 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 B3GNT2Q9NY97 397 aa17.23■□□□□ 0.35
VEGFB-201ENST00000309422 VSX1Q9NZR4 365 aaPredicted RBP17.23■□□□□ 0.35
VEGFB-201ENST00000309422 E7EQL1 145 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 SERPINA5P05154 406 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 CELA3BP08861 270 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 ANXA8P13928 327 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 ZNF26P17031 533 aaPredicted RBP17.22■□□□□ 0.35
VEGFB-201ENST00000309422 GLO1Q04760 184 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 SNTB2Q13425 540 aaKnown RBP17.22■□□□□ 0.35
VEGFB-201ENST00000309422 RAB39AQ14964 217 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 FAM27BQ5VT28 67 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 SHEQ5VZ18 495 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 PAPD5Q8NDF8 572 aaKnown RBP17.22■□□□□ 0.35
VEGFB-201ENST00000309422 NUP37Q8NFH4 326 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 OR10H5Q8NGA6 315 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 OR4K13Q8NH42 304 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 NMD3Q96D46 503 aaKnown RBP17.22■□□□□ 0.35
VEGFB-201ENST00000309422 TSSK6Q9BXA6 273 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 VNN3Q9NY84 501 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 AP4S1Q9Y587 144 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 PMF1-BGLAPU3KQ54 211 aa17.22■□□□□ 0.35
VEGFB-201ENST00000309422 IGHV2OR16-5A0A0B4J2B6 119 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 ZNF503-AS2A6NEH8 195 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 RIIAD1A6NNX1 92 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 TIPRLO75663 272 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 SOX14O95416 240 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 HLA-DQA2P01906 255 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 CST2P09228 141 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 ZNF3P17036 446 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 LAP3P28838 519 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 ATP5J2P56134 94 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 FXYD6P3P58550 94 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 NKX6-1P78426 367 aaPredicted RBP17.21■□□□□ 0.35
VEGFB-201ENST00000309422 ZNF770Q6IQ21 691 aaPredicted RBP17.21■□□□□ 0.35
VEGFB-201ENST00000309422 KRT80Q6KB66 452 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 SDR9C7Q8NEX9 313 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 LILRB1Q8NHL6 650 aaPredicted RBP17.21■□□□□ 0.35
VEGFB-201ENST00000309422 HTRA1Q92743 480 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 FEVQ99581 238 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 BARX1Q9HBU1 254 aaPredicted RBP17.21■□□□□ 0.35
VEGFB-201ENST00000309422 NOX3Q9HBY0 568 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 POLE4Q9NR33 117 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 IL20Q9NYY1 176 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 KLHL21Q9UJP4 597 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 UGT2A1Q9Y4X1 527 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms