RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FAM27BQ5VT28 67 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 SLX4IPQ5VYV7 408 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 ANKRD34AQ69YU3 496 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 SYT9Q86SS6 491 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC37A3Q8NCC5 494 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 C14orf79Q96F83 325 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 NUAK2Q9H093 628 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 RIBC2Q9H4K1 309 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 ESRP2Q9H6T0 727 aaKnown RBP15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 RPRD1BQ9NQG5 326 aaKnown RBP15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 KCNG2Q9UJ96 466 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 B9D1Q9UPM9 204 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 UGT2A1Q9Y4X1 527 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 ICE1Q9Y2F5 2266 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 FREM1Q5H8C1 2179 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 ALPK2Q86TB3 2170 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 PTPN13Q12923 2485 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 A0A096LPE4 126 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 A0A1W2PPZ6 126 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 OR6C68A6NDL8 312 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 MITFO75030 526 aaPredicted RBP15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 HRGP04196 525 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 CST2P09228 141 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 SSTR2P30874 369 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 CDC42P60953 191 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 LSM6P62312 80 aaKnown RBP15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 SNAPC1Q16533 368 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 ZNF362Q5T0B9 420 aaPredicted RBP15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 ACSM5Q6NUN0 579 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 TMEM53Q6P2H8 277 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 TMEM108Q6UXF1 575 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC16A14Q7RTX9 510 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 IQCF1Q8N6M8 205 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 WDR31Q8NA23 367 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 IL17RDQ8NFM7 739 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 OR52N5Q8NH56 324 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 TRUB1Q8WWH5 349 aaKnown RBP15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 RADILQ96JH8 1075 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 DDOQ99489 341 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 C1orf198Q9H425 327 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 SEC61A2Q9H9S3 476 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 POLE4Q9NR33 117 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 SMPD3Q9NY59 655 aaPredicted RBP15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 MOKQ9UQ07 419 aa15.66■□□□□ 0.1
SSSCA1-201ENST00000309328 HCFC1P51610 2035 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 IGLV1-36A0A0B4J1U3 117 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 A0A1W2PPL8 197 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 C12orf71A8MTZ7 269 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 PRR23D1E9PI22 279 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 PRODHO43272 600 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 RAB36O95755 333 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 PTHP01270 115 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 THBDP07204 575 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 PRR23D2P0DMB1 279 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 CBR1P16152 277 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 PTAFRP25105 342 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 CAPZA2P47755 286 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 CRMP1Q14194 572 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 KCNMB1Q16558 191 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 GSG1Q2KHT4 349 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 OGFRL1Q5TC84 451 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 C12orf73Q69YU5 71 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 WFDC8Q8IUA0 241 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 OR6V1Q8N148 313 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 PROKR2Q8NFJ6 384 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 ZC3HAV1LQ96H79 300 aaKnown RBP15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 HRASLS5Q96KN8 279 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 NMNAT2Q9BZQ4 307 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 GRIP2Q9C0E4 1043 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 TVP23BQ9NYZ1 205 aa15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 CRNNQ9UBG3 495 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-201ENST00000309328 IGKV1D-43A0A0B4J1Z2 117 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 A6NNC1 897 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 IGKV3-15P01624 115 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 PEX2P28328 305 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 HSF2Q03933 536 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 SGCAQ16586 387 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 SLC35D3Q5M8T2 416 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 DEPDC4Q8N2C3 294 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 CYB561A3Q8NBI2 242 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 OR8J1Q8NGP2 316 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 NABP1Q96AH0 204 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 RERGLQ9H628 205 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 SRA1Q9HD15 236 aaKnown RBP15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 CCNB1IP1Q9NPC3 277 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 IMPAD1Q9NX62 359 aa15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 COA3Q9Y2R0 106 aaPredicted RBP15.64■□□□□ 0.09
SSSCA1-201ENST00000309328 MPZL2O60487 215 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 TMCC2O75069 709 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 SEC14L2O76054 403 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 CD79AP11912 226 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 SPI1P17947 270 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 FMO3P31513 532 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 PLP2Q04941 152 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 SCRN3Q0VDG4 424 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 SNTB1Q13884 538 aaKnown RBP15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 TMEM236Q5W0B7 351 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 SKA3Q8IX90 412 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 ALDH16A1Q8IZ83 802 aa15.63■□□□□ 0.09
SSSCA1-201ENST00000309328 ZNF555Q8NEP9 628 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms