RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 TMEM45BQ96B21 275 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 SLC25A44Q96H78 314 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-201ENST00000293889 GMPPAQ96IJ6 420 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-201ENST00000293889 KCNK17Q96T54 332 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 TM9SF2Q99805 663 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 HCAR1Q9BXC0 346 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 MRPL13Q9BYD1 178 aaKnown RBP15.76■□□□□ 0.11
CCDC78-201ENST00000293889 MED20Q9H944 212 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 GLRX2Q9NS18 164 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 CNOT2Q9NZN8 540 aaKnown RBP15.76■□□□□ 0.11
CCDC78-201ENST00000293889 RCE1Q9Y256 329 aa15.76■□□□□ 0.11
CCDC78-201ENST00000293889 NOSIPQ9Y314 301 aaKnown RBP15.76■□□□□ 0.11
CCDC78-201ENST00000293889 METTL15A6NJ78 407 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 SS18L1O75177 396 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-201ENST00000293889 PGA4P0DJD7 388 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 PGA3P0DJD8 388 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 AGTR1P30556 359 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 PSMD7P51665 324 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 PPP5CP53041 499 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 GUSBP1Q15486 140 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 OR2A2Q6IF42 318 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 CXXC5Q7LFL8 322 aaKnown RBP15.75■□□□□ 0.11
CCDC78-201ENST00000293889 ATCAYQ86WG3 371 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 GCNT2Q8N0V5 402 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 BBS1Q8NFJ9 593 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 ITFG2Q969R8 447 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 OTULINQ96BN8 352 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 LRR1Q96L50 414 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 CDCA4Q9BXL8 241 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 FN3KQ9H479 309 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 VSX1Q9NZR4 365 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-201ENST00000293889 UGT2A1Q9Y4X1 527 aa15.75■□□□□ 0.11
CCDC78-201ENST00000293889 UBR5O95071 2799 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 SLC22A23A1A5C7 686 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 ISPDA4D126 451 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 PRR23D1E9PI22 279 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 AKAP8O43823 692 aaKnown RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 TOXO94900 526 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 RENP00797 406 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 IGHG1P01857 330 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 PRR23D2P0DMB1 279 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 GLI4P10075 376 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 PAICSP22234 425 aaKnown RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 LIPAP38571 399 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 CLRN1P58418 232 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 IFITM3Q01628 133 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 TMEM201Q5SNT2 666 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 SLC25A30Q5SVS4 291 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 USP43Q70EL4 1123 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 NUFIP2Q7Z417 695 aaKnown RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 BTLAQ7Z6A9 289 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 ZBTB8BQ8NAP8 495 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 OR9Q1Q8NGQ5 310 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 INTS12Q96CB8 462 aaKnown RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 SNX18Q96RF0 628 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 TTYH2Q9BSA4 534 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 NMNAT2Q9BZQ4 307 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 SYT4Q9H2B2 425 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 RPRD1BQ9NQG5 326 aaKnown RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 DNAJC27Q9NZQ0 273 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 CCDC59Q9P031 241 aaKnown RBP15.74■□□□□ 0.11
CCDC78-201ENST00000293889 SH3BGRL2Q9UJC5 107 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 HIVEP3Q5T1R4 2406 aa15.74■□□□□ 0.11
CCDC78-201ENST00000293889 DOCK7Q96N67 2140 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 ENTPD6O75354 484 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 MRPL33O75394 65 aaKnown RBP15.73■□□□□ 0.11
CCDC78-201ENST00000293889 CLUP10909 449 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 PIPP12273 146 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-201ENST00000293889 EDNRAP25101 427 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 OCLNQ16625 522 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 EIF2S3LQ2VIR3 472 aaKnown RBP15.73■□□□□ 0.11
CCDC78-201ENST00000293889 AADACL4Q5VUY2 407 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.73■□□□□ 0.11
CCDC78-201ENST00000293889 ZBTB46Q86UZ6 589 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 NOXO1Q8NFA2 376 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 TMEM54Q969K7 222 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 ZNF582Q96NG8 517 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-201ENST00000293889 TSSK2Q96PF2 358 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 ALG12Q9BV10 488 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 DCSTAMPQ9H295 470 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 PARPBPQ9NWS1 579 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 CLN6Q9NWW5 311 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 DAPK2Q9UIK4 370 aa15.73■□□□□ 0.11
CCDC78-201ENST00000293889 EFCAB10A6NFE3 127 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 J3QKU1 62 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 AIREO43918 545 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 SLC43A1O75387 559 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 GYPBP06028 91 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 TIMP3P35625 211 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 CSNK1A1P48729 337 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 PER3P56645 1201 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 FMODQ06828 376 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 LGALS3BPQ08380 585 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 FOXF2Q12947 444 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 HIST3H3Q16695 136 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 TIGD6Q17RP2 521 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 ZNF404Q494X3 552 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 ZNF367Q7RTV3 350 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 C20orf196Q8IYI0 205 aa15.72■□□□□ 0.11
CCDC78-201ENST00000293889 RPL3LQ92901 407 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms