RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ZNF615Q8N8J6 731 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 SYT14Q8NB59 555 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 INO80EQ8NBZ0 244 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 OR6N1Q8NGY5 312 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 OR5W2Q8NH69 310 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 OR5K2Q8NHB8 316 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 RLN3Q8WXF3 142 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 BPIFA2Q96DR5 249 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CCDC120Q96HB5 630 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 HRASLS5Q96KN8 279 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 OR7D2Q96RA2 312 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CNN2Q99439 309 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 CCDC32Q9BV29 185 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ATG5Q9H1Y0 275 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 C7orf69Q9H7B7 122 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 METTL8Q9H825 291 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 VNN3Q9NY84 501 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CLEC2DQ9UHP7 191 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ZNF639Q9UID6 485 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 TTC3P53804 2025 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 NUP214P35658 2090 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 ARPC4-TTLL3A0A0A6YYG9 625 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CLDN24A6NM45 220 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 H3BQ06 376 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 TMX2-CTNND1H3BSU7 103 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 M0R233 179 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 LYRM1O43325 122 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 TRAPPC6AO75865 159 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 SEMA4FO95754 770 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 HCKP08631 526 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 H2AFB2P0C5Z0 115 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 APEHP13798 732 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 GTF2F2P13984 249 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 DNASE1P24855 282 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 EPHA2P29317 976 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 TGFBR1P36897 503 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 MMP12P39900 470 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CBX5P45973 191 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ARRB1P49407 418 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 FXYD6P3P58550 94 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 RPL23AP62750 156 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 MAT1AQ00266 395 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 E2F1Q01094 437 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 GALK2Q01415 458 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 DUSP2Q05923 314 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 RAB40BQ12829 278 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 GK2Q14410 553 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 MAPK14Q16539 360 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ACSM3Q53FZ2 586 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 KDM4DQ6B0I6 523 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 HIST2H2BCQ6DN03 193 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 HIST2H2BDQ6DRA6 164 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ANKRD54Q6NXT1 300 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 SHISA6Q6ZSJ9 500 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 NRARPQ7Z6K4 114 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 TMEM179BQ7Z7N9 219 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 PHC2Q8IXK0 858 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CCDC36Q8IYA8 594 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 PRR22Q8IZ63 422 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 BATF2Q8N1L9 274 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 PAQR4Q8N4S7 273 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 BMPERQ8N8U9 685 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 GDPD1Q8N9F7 314 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CDRT4Q8N9R6 151 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 FAM83FQ8NEG4 500 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 OR4K17Q8NGC6 315 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 OR52N4Q8NGI2 321 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 UBTD2Q8WUN7 234 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 C15orf40Q8WUR7 153 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CCDC107Q8WV48 283 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ACOT11Q8WXI4 607 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 TM4SF18Q96CE8 201 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 PRRC1Q96M27 445 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 MS4A4EQ96PG1 132 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ZNF559Q9BR84 538 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 DPCDQ9BVM2 203 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 GTPBP2Q9BX10 602 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 RNF167Q9H6Y7 350 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 RNF121Q9H920 327 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 MED20Q9H944 212 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 CHMP1AQ9HD42 196 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 DNAJC4Q9NNZ3 241 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 PRSS16Q9NQE7 514 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 GSKIPQ9P0R6 139 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 GMEB2Q9UKD1 530 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 POU2F3Q9UKI9 436 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 NOP16Q9Y3C1 178 aaKnown RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 BRWD1Q9NSI6 2320 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 SCN1AP35498 2009 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 MEIOCA2RUB1 952 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 WASHC1A8K0Z3 465 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 ZNF878C9JN71 531 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 H0Y8G0 127 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 GFYI3L273 518 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 PRYO14603 147 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 KCNJ13O60928 360 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 AIFM1O95831 613 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 IGFBP1P08833 259 aaPredicted RBP2.61□□□□□ -1.99
HERC4-201ENST00000277817 FGF5P12034 268 aa2.61□□□□□ -1.99
HERC4-201ENST00000277817 MYOGP15173 224 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms