RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZNF547Q8IVP9 402 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SLC35F3Q8IY50 421 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 AICDAQ9GZX7 198 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SMCO4Q9NRQ5 59 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 TMED7Q9Y3B3 224 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 TCF20Q9UGU0 1960 aaKnown RBP11.66□□□□□ -0.54
HERC6-202ENST00000273960 A0A1W2PPE2 198 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 WRBO00258 174 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 OGG1O15527 345 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 LRP3O75074 770 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 RAB40ALP0C0E4 278 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 ACTC1P68032 377 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 ACTA1P68133 377 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SLC9A3R2Q15599 337 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 GJD3Q8N144 294 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 GVQW1Q8N7I0 195 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SETD7Q8WTS6 366 aaKnown RBP11.66□□□□□ -0.54
HERC6-202ENST00000273960 RAB40AQ8WXH6 277 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 CST11Q9H112 138 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SYT4Q9H2B2 425 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SFXN1Q9H9B4 322 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 MMP24Q9Y5R2 645 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 MSGN1A6NI15 193 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 RNASEK-C17orf49H0YIS7 233 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 DCTN6O00399 190 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 CTAG2O75638 210 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 OR2F2O95006 317 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 CTSLP07711 333 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 ZNF136P52737 540 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 OR2F1Q13607 317 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 EXOSC7Q15024 291 aaKnown RBP11.66□□□□□ -0.54
HERC6-202ENST00000273960 ZNF124Q15973 351 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 BAP18Q8IXM2 172 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 OR4K17Q8NGC6 315 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 OR56A1Q8NGH5 318 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 SPPL3Q8TCT6 385 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 FOXRED1Q96CU9 486 aaPredicted RBP11.66□□□□□ -0.54
HERC6-202ENST00000273960 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
HERC6-202ENST00000273960 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 KLHDC2Q9Y2U9 406 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 AMDHD2Q9Y303 409 aa11.66□□□□□ -0.54
HERC6-202ENST00000273960 DNAJB6O75190 326 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 CYB5AP00167 134 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 HLA-DQA2P01906 255 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 OR8U8P0C7N1 319 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
HERC6-202ENST00000273960 PRF1P14222 555 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 RPS10P46783 165 aaKnown RBP11.65□□□□□ -0.54
HERC6-202ENST00000273960 GPM6BQ13491 265 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 TSC22D1Q15714 1073 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 C2orf76Q3KRA6 126 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 DMRTC1Q5HYR2 192 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 GATSQ8NAP1 163 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 OR5M8Q8NGP6 311 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 TIFAQ96CG3 184 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 KXD1Q9BQD3 176 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 PLXNB3Q9ULL4 1909 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 SLC35D2Q76EJ3 337 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 FAM220AQ7Z4H9 259 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 ADIPOR2Q86V24 386 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 JAGN1Q8N5M9 183 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 OR6N2Q8NGY6 317 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 RNF141Q8WVD5 230 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 CPEB1Q9BZB8 566 aaKnown RBP11.65□□□□□ -0.54
HERC6-202ENST00000273960 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
HERC6-202ENST00000273960 ST8SIA5O15466 376 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 CPMP14384 443 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 SERPINF1P36955 418 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 EIF2S3P41091 472 aaKnown RBP11.65□□□□□ -0.55
HERC6-202ENST00000273960 ACTA2P62736 377 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 ACTG2P63267 376 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 LEG1Q6P5S2 330 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 ZAR1Q86SH2 424 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 FRMD1Q8N878 549 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 ADAD2Q8NCV1 583 aaKnown RBP11.65□□□□□ -0.55
HERC6-202ENST00000273960 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.55
HERC6-202ENST00000273960 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 TMEM27Q9HBJ8 222 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 PRSS16Q9NQE7 514 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 INPP5EQ9NRR6 644 aa11.65□□□□□ -0.55
HERC6-202ENST00000273960 OR52A4PA6NMU1 304 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 ZNF736B4DX44 427 aaPredicted RBP11.64□□□□□ -0.55
HERC6-202ENST00000273960 XRCC3O43542 346 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 LDB3O75112 727 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 ADAP1O75689 374 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 PMS2P2O95744 297 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 NGFRP08138 427 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 OR2T7P0C7T2 308 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 G0S2P27469 103 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
HERC6-202ENST00000273960 ZNF616Q08AN1 781 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 PSRC1Q6PGN9 363 aaPredicted RBP11.64□□□□□ -0.55
HERC6-202ENST00000273960 UQCC3Q6UW78 93 aa11.64□□□□□ -0.55
HERC6-202ENST00000273960 PARS2Q7L3T8 475 aaKnown RBP11.64□□□□□ -0.55
HERC6-202ENST00000273960 COX18Q8N8Q8 333 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms