RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 COA3Q9Y2R0 106 aaPredicted RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 SPEGQ15772 3267 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 PPM1BO75688 479 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 CSF1P09603 554 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 SULT1A3P0DMM9 295 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 SULT1A4P0DMN0 295 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 VSIG10L2P0DP72 767 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 GABRR1P24046 479 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 CLDN6P56747 220 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 MFSD13AQ14CX5 517 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 GLDNQ6ZMI3 551 aaPredicted RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 ZNF417Q8TAU3 575 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ST7LQ8TDW4 575 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 FOXRED1Q96CU9 486 aaPredicted RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 KTI12Q96EK9 354 aaPredicted RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 PHB2Q99623 299 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ARHGDIGQ99819 225 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 KCNE5Q9UJ90 142 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 KLHDC2Q9Y2U9 406 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ZNF318Q5VUA4 2279 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 DOCK4Q8N1I0 1966 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ARPC4-TTLL3A0A0A6YYG9 625 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 TRAV20A0A0B4J274 112 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 BHLHE40O14503 412 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 AKR7A3O95154 331 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ICAM2P13598 275 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 HTR2CP28335 458 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ACTBP60709 375 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ACTG1P63261 375 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 CSNK2A1P68400 391 aaPredicted RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 RPL18Q07020 188 aaKnown RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 KCTD18Q6PI47 426 aaPredicted RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 MEX3BQ6ZN04 569 aaKnown RBP9.2□□□□□ -0.94
PALB2-201ENST00000261584 GABRG1Q8N1C3 465 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 IL17RCQ8NAC3 791 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 SUMF1Q8NBK3 374 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 CSNK2A3Q8NEV1 391 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 MARCH1Q8TCQ1 289 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 STK35Q8TDR2 534 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 C14orf79Q96F83 325 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 CNTNAP3BQ96NU0 1288 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 PCDHB10Q9UN67 800 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ZNF337Q9Y3M9 751 aa9.2□□□□□ -0.94
PALB2-201ENST00000261584 ARHGEF17Q96PE2 2063 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 DOCK9Q9BZ29 2069 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 SLC22A23A1A5C7 686 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 EFCAB7A8K855 629 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 NMBP08949 121 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 GAAP10253 952 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 GLULP15104 373 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 DIO1P49895 249 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 HTRA4P83105 476 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 FMODQ06828 376 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 C19orf57Q0VDD7 668 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 PDCD1Q15116 288 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 ARHGAP11BQ3KRB8 267 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 SLC18B1Q6NT16 456 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 MCATQ8IVS2 390 aaKnown RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 TMEM151BQ8IW70 566 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 GALNT16Q8N428 558 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 HSD17B11Q8NBQ5 300 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 TMIEQ8NEW7 156 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 RGP1Q92546 391 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 ISOC2Q96AB3 205 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 RSRP1Q9BUV0 290 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 PPIL1Q9Y3C6 166 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 CSAG2Q9Y5P2 127 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 PUS1Q9Y606 427 aaKnown RBP eCLIP9.19□□□□□ -0.94
PALB2-201ENST00000261584 USP34Q70CQ2 3546 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 SERINC4A6NH21 518 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 RHPN2P1A8MT19 583 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ZNHIT1O43257 154 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 OLFM2O95897 454 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 GIPP09681 153 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 UBBP0CG47 229 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 UBCP0CG48 685 aaKnown RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 SERPINA2P20848 420 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 NFYBP25208 207 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 KCNJ3P48549 501 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ZNF136P52737 540 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 EMP2P54851 167 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 H2BFSP57053 126 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ACY1Q03154 408 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 PAN3Q58A45 887 aaKnown RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 TMEM225Q6GV28 225 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 C19orf48Q6RUI8 117 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 CHRDL2Q6WN34 429 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 CPEB2Q7Z5Q1 589 aaKnown RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 SLC51BQ86UW2 128 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ETFBKMTQ8IXQ9 262 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ZNF679Q8IYX0 411 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ZNF578Q96N58 590 aaPredicted RBP9.19□□□□□ -0.94
PALB2-201ENST00000261584 ZNF285Q96NJ3 590 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 AICDAQ9GZX7 198 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 RGCCQ9H4X1 137 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 COPS7AQ9UBW8 275 aa9.19□□□□□ -0.94
PALB2-201ENST00000261584 ADAM29Q9UKF5 820 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms